Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29192	Nars	asparaginyl-tRNA synthetase	18		70223
Gene Ontology	asparagine-tRNA ligase activity | asparaginyl-tRNA aminoacylation | aspartate-tRNA ligase activity | aspartyl-tRNA aminoacylation | ATP binding | cytoplasm | intracellular | ligase activity | nucleic acid binding | protein biosynthesis | soluble fraction | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	NARS[asparaginyl-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCGTGTGTTC (5) 13.1 0.0131 P8 Cb GC ATGTCAGAAA (4) 9.8 0.0098 P8 Cb GC ATCACAGGTG (7) 3.3 0.0033 P8 Cb GC ATTAAAAAAA (10) 1.6 0.0016 P8 Cb GC GTAAACAAAA (4) 1.6 0.0016 P8 Cb GC TGGTTGCTCT (3) 1.6 0.0016 Cb medulloblastoma CCGTGTGTTC (5) 27.7 0.0277 Cb medulloblastoma ATGTCAGAAA (4) 6.9 0.0069 Cb medulloblastoma ATTATACAGT (3) 6.9 0.0069 Cb medulloblastoma GTAAACAAAA (4) 6.9 0.0069 Cb medulloblastoma AAATATATTT (4) 2.3 0.0023 Cb medulloblastoma TCACTCTTTA (2) 2.3 0.0023 Cb medulloblastoma TGGTTGCTCT (3) 2.3 0.0023 P8 GC+1d culture ATGTCAGAAA (4) 30.8 0.0308 P8 GC+1d culture CCGTGTGTTC (5) 8 0.008 P8 GC+1d culture ATCACAGGTG (7) 4.6 0.0046 P8 GC+1d culture AAATATATTT (4) 2.3 0.0023 P8 GC+1d culture ATTAAAAAAA (10) 2.3 0.0023 P8 GC+1d culture ATTATACAGT (3) 1.1 0.0011 P8 GC+1d culture GTAAACAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture CCGTGTGTTC (5) 11.7 0.0117 P8 GC+SHH+1d culture ATGTCAGAAA (4) 10.5 0.0105 P8 GC+SHH+1d culture ATTAAAAAAA (10) 4.7 0.0047 P8 GC+SHH+1d culture ATCACAGGTG (7) 2.3 0.0023 P8 GC+SHH+1d culture ATTATACAGT (3) 2.3 0.0023 P8 GC+SHH+1d culture TCACTCTTTA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCATTGCAA (2) 1.2 0.0012 3T3 fibroblasts CCGTGTGTTC (5) 14 0.014 3T3 fibroblasts ATTAAAAAAA (10) 3.5 0.0035 E15 cortex CATCTGGGGA (6) 14.8 0.0148 E15 cortex TGGTTGCTCT (3) 4.9 0.0049 P1 cortex CCGTGTGTTC (5) 13.6 0.0136 P1 cortex AAATATATTT (4) 4.5 0.0045 P1 cortex TGGTTGCTCT (3) 4.5 0.0045 Hypothalamus ATTAAAAAAA (10) 3.6 0.0036 Hypothalamus CCGTGTGTTC (5) 1.8 0.0018 E12.5 retina CCGTGTGTTC (5) 5.6 0.0056 E12.5 retina ATCACAGGTG (7) 1.9 0.0019 E12.5 retina ATTAAAAAAA (10) 1.9 0.0019 E12.5 retina ATTATACAGT (3) 1.9 0.0019 E12.5 retina TGGTTGCTCT (3) 1.9 0.0019 E14.5 retina CCGTGTGTTC (5) 12.8 0.0128 E14.5 retina ATTAAAAAAA (10) 10.9 0.0109 E14.5 retina ATTATACAGT (3) 5.5 0.0055 E14.5 retina AAATATATTT (4) 3.6 0.0036 E14.5 retina ATCACAGGTG (7) 3.6 0.0036 E14.5 retina ATGTCAGAAA (4) 1.8 0.0018 E14.5 retina TGGTTGCTCT (3) 1.8 0.0018 E16.5 retina CCGTGTGTTC (5) 9.1 0.0091 E16.5 retina ATTAAAAAAA (10) 3.6 0.0036 E16.5 retina ATTATACAGT (3) 3.6 0.0036 E16.5 retina ATCACAGGTG (7) 1.8 0.0018 E16.5 retina ATGTCAGAAA (4) 1.8 0.0018 E16.5 retina TGGTTGCTCT (3) 1.8 0.0018 E18.5 retina ATTAAAAAAA (10) 9.1 0.0091 E18.5 retina CCGTGTGTTC (5) 9.1 0.0091 E18.5 retina ATCACAGGTG (7) 5.5 0.0055 E18.5 retina ATTATACAGT (3) 1.8 0.0018 E18.5 retina GAAGGGGTAT 1.8 0.0018 E18.5 retina TTCATTGCAA (2) 1.8 0.0018 P0.5 retina CCGTGTGTTC (5) 5.9 0.0059 P0.5 retina ATCACAGGTG (7) 3.9 0.0039 P0.5 retina AAATATATTT (4) 2 0.002 P0.5 retina ATGTCAGAAA (4) 2 0.002 P0.5 retina TGGTTGCTCT (3) 2 0.002 P0.5 retina TTCATTGCAA (2) 2 0.002 P2.5 retina CCGTGTGTTC (5) 12.3 0.0123 P2.5 retina ATCACAGGTG (7) 3.5 0.0035 P2.5 retina ATTAAAAAAA (10) 1.8 0.0018 P4.5 retina CCGTGTGTTC (5) 5.9 0.0059 P4.5 retina TGGTTGCTCT (3) 4 0.004 P4.5 retina AAATATATTT (4) 2 0.002 P4.5 retina ATTAAAAAAA (10) 2 0.002 P4.5 retina ATTATACAGT (3) 2 0.002 P4.5 retina GAAGGGGTAT 2 0.002 P6.5 retina CCGTGTGTTC (5) 11.7 0.0117 P6.5 retina AAATATATTT (4) 3.3 0.0033 P6.5 retina TTCATTGCAA (2) 3.3 0.0033 P6.5 retina ATGTCAGAAA (4) 1.7 0.0017 P6.5 retina ATTATACAGT (3) 1.7 0.0017 P10.5 crx- retina CCGTGTGTTC (5) 5.6 0.0056 P10.5 crx- retina ATCACAGGTG (7) 3.7 0.0037 P10.5 crx- retina ATGTCAGAAA (4) 3.7 0.0037 P10.5 crx- retina ATTAAAAAAA (10) 1.9 0.0019 P10.5 crx- retina TCACTCTTTA (2) 1.9 0.0019 P10.5 crx- retina TGGTTGCTCT (3) 1.9 0.0019 P10.5 crx+ retina CCGTGTGTTC (5) 9.6 0.0096 P10.5 crx+ retina ATTATACAGT (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTCT (3) 1.9 0.0019 Adult retinal CCGTGTGTTC (5) 18.5 0.0185 Adult retinal ATTATACAGT (3) 3.7 0.0037 Adult retinal GAAGGGGTAT 1.9 0.0019 ONL ATTATACAGT (3) 1.9 0.0019 ONL CCGTGTGTTC (5) 1.9 0.0019 ONL GTAAACAAAA (4) 1.9 0.0019