Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29194	Kcmf1	potassium channel modulatory factor 1	6		74287
Human Homolog	KCMF1[potassium channel modulatory factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAGGCTC 3.3 0.0033 P8 Cb GC TCACAGATGA (2) 1.6 0.0016 P8 Cb GC TCTAAAAAAA (15) 1.6 0.0016 Cb medulloblastoma TCTAAAAAAA (15) 13.9 0.0139 Cb medulloblastoma TTTAAAAAAA (34) 6.9 0.0069 Cb medulloblastoma AGTTTCAGTG 4.6 0.0046 Cb medulloblastoma CAAAAGGCTC 2.3 0.0023 P8 GC+1d culture TCTAAAAAAA (15) 6.8 0.0068 P8 GC+1d culture CAAAAGGCTC 5.7 0.0057 P8 GC+1d culture GAGAGCGAGC 2.3 0.0023 P8 GC+1d culture GAGAAGCGAG 1.1 0.0011 P8 GC+SHH+1d culture CAAAAGGCTC 5.9 0.0059 P8 GC+SHH+1d culture TTTAAAAAAA (34) 5.9 0.0059 P8 GC+SHH+1d culture TCTAAAAAAA (15) 3.5 0.0035 P8 GC+SHH+1d culture TCAAGGTACA 1.2 0.0012 3T3 fibroblasts CAAAAGGCTC 7 0.007 3T3 fibroblasts GAGAGCGAGC 3.5 0.0035 3T3 fibroblasts TCACAGATGA (2) 3.5 0.0035 E15 cortex GAGAGCGAGC 4.9 0.0049 P1 cortex TCTAAAAAAA (15) 9.1 0.0091 Hypothalamus TCTAAAAAAA (15) 10.9 0.0109 Hypothalamus TTTAAAAAAA (34) 10.9 0.0109 Hypothalamus AGTTTCAGTG 1.8 0.0018 Hypothalamus CAAAAGGCTC 1.8 0.0018 E12.5 retina CAAAAGGCTC 5.6 0.0056 E12.5 retina TCTAAAAAAA (15) 3.8 0.0038 E12.5 retina GAGAAGCGAG 1.9 0.0019 E12.5 retina TTTAAAAAAA (34) 1.9 0.0019 E14.5 retina TTTAAAAAAA (34) 9.1 0.0091 E14.5 retina TCTAAAAAAA (15) 5.5 0.0055 E14.5 retina GAGAAGCGAG 1.8 0.0018 E16.5 retina CAAAAGGCTC 5.4 0.0054 E16.5 retina TCTAAAAAAA (15) 3.6 0.0036 E16.5 retina GAGAAGCGAG 1.8 0.0018 E16.5 retina TCACAGATGA (2) 1.8 0.0018 E16.5 retina TTTAAAAAAA (34) 1.8 0.0018 E18.5 retina TCTAAAAAAA (15) 10.9 0.0109 E18.5 retina TTTAAAAAAA (34) 10.9 0.0109 E18.5 retina AGTTTCAGTG 1.8 0.0018 E18.5 retina CAAAAGGCTC 1.8 0.0018 P0.5 retina CAAAAGGCTC 2 0.002 P0.5 retina TCACAGATGA (2) 2 0.002 P0.5 retina TCTAAAAAAA (15) 2 0.002 P0.5 retina TTTAAAAAAA (34) 2 0.002 P2.5 retina TCTAAAAAAA (15) 5.3 0.0053 P2.5 retina CAAAAGGCTC 3.5 0.0035 P2.5 retina TCAAGGTACA 3.5 0.0035 P2.5 retina GAGAAGCGAG 1.8 0.0018 P2.5 retina TTTAAAAAAA (34) 1.8 0.0018 P4.5 retina TCTAAAAAAA (15) 11.9 0.0119 P4.5 retina TTTAAAAAAA (34) 5.9 0.0059 P4.5 retina CAAAAGGCTC 2 0.002 P6.5 retina TCTAAAAAAA (15) 10 0.01 P6.5 retina TTTAAAAAAA (34) 6.7 0.0067 P6.5 retina GAGAAGCGAG 5 0.005 P6.5 retina AGTTTCAGTG 1.7 0.0017 P6.5 retina CAAAAGGCTC 1.7 0.0017 P6.5 retina TCACAGATGA (2) 1.7 0.0017 P10.5 crx- retina TCAAGGTACA 1.9 0.0019 P10.5 crx- retina TCTAAAAAAA (15) 1.9 0.0019 P10.5 crx+ retina TCTAAAAAAA (15) 3.8 0.0038 P10.5 crx+ retina CAAAAGGCTC 1.9 0.0019 P10.5 crx+ retina GAGAGCGAGC 1.9 0.0019 P10.5 crx+ retina TCACAGATGA (2) 1.9 0.0019 Adult retinal TCACAGATGA (2) 7.4 0.0074 Adult retinal TCTAAAAAAA (15) 1.9 0.0019 ONL TTTAAAAAAA (34) 7.7 0.0077 ONL TCTAAAAAAA (15) 3.8 0.0038