Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292056	Acsl5	acyl-CoA synthetase long-chain family member 5	19		71879
Gene Ontology	catalytic activity | fatty acid metabolism | ligase activity | long-chain-fatty-acid-CoA ligase activity | magnesium ion binding | metabolism | mitochondrion
Human Homolog	ACSL5[acyl-CoA synthetase long-chain family member 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAATGTTG (5) 13.1 0.0131 P8 Cb GC AAAATGTTGT (5) 1.6 0.0016 P8 Cb GC CCAGTCAGGT (5) 1.6 0.0016 P8 Cb GC GACTTGGACA (3) 1.6 0.0016 P8 Cb GC TGGTGCCTCT (7) 1.6 0.0016 P8 Cb GC TTTTGTCTTT (5) 1.6 0.0016 Cb medulloblastoma TGGTGCCTCT (7) 4.6 0.0046 Cb medulloblastoma AAAATGTTGT (5) 2.3 0.0023 P8 GC+1d culture AAAATGTTGT (5) 8 0.008 P8 GC+1d culture AAAAATGTTG (5) 5.7 0.0057 P8 GC+1d culture TGGTGCCTCT (7) 5.7 0.0057 P8 GC+1d culture CCAGTCAGGT (5) 1.1 0.0011 P8 GC+SHH+1d culture AAAAATGTTG (5) 11.7 0.0117 P8 GC+SHH+1d culture TGGTGCCTCT (7) 10.5 0.0105 P8 GC+SHH+1d culture TTTTGTCTTT (5) 3.5 0.0035 3T3 fibroblasts TGGTGCCTCT (7) 21 0.021 3T3 fibroblasts CCAGTCAGGT (5) 3.5 0.0035 E15 cortex GACTTGGACA (3) 4.9 0.0049 P1 cortex AAAAATGTTG (5) 4.5 0.0045 P1 cortex GACTTGGACA (3) 4.5 0.0045 Hypothalamus AAAAATGTTG (5) 3.6 0.0036 Hypothalamus CCAGTCAGGT (5) 1.8 0.0018 E12.5 retina AAAAATGTTG (5) 13.1 0.0131 E12.5 retina GACTTGGACA (3) 1.9 0.0019 E12.5 retina TGGTGCCTCT (7) 1.9 0.0019 E14.5 retina AAAAATGTTG (5) 10.9 0.0109 E14.5 retina TGGTGCCTCT (7) 3.6 0.0036 E14.5 retina CCAGTCAGGT (5) 1.8 0.0018 E14.5 retina GACTTGGACA (3) 1.8 0.0018 E16.5 retina AAAAATGTTG (5) 9.1 0.0091 E16.5 retina TGGTGCCTCT (7) 3.6 0.0036 E16.5 retina TTTTGTCTTT (5) 3.6 0.0036 E16.5 retina CCAGTCAGGT (5) 1.8 0.0018 E16.5 retina GACTTGGACA (3) 1.8 0.0018 E18.5 retina AAAAATGTTG (5) 12.7 0.0127 E18.5 retina TCCCTTTGAG (4) 1.8 0.0018 E18.5 retina TGGTGCCTCT (7) 1.8 0.0018 E18.5 retina TTTTGTCTTT (5) 1.8 0.0018 P0.5 retina TGGTGCCTCT (7) 3.9 0.0039 P0.5 retina AAAAATGTTG (5) 2 0.002 P2.5 retina AAAAATGTTG (5) 14.1 0.0141 P2.5 retina TGGTGCCTCT (7) 5.3 0.0053 P2.5 retina GACTTGGACA (3) 3.5 0.0035 P2.5 retina TCCCTTTGAG (4) 1.8 0.0018 P4.5 retina GACTTGGACA (3) 5.9 0.0059 P4.5 retina AAAAATGTTG (5) 2 0.002 P4.5 retina TGGTGCCTCT (7) 2 0.002 P6.5 retina AAAAATGTTG (5) 8.3 0.0083 P6.5 retina TGGTGCCTCT (7) 5 0.005 P6.5 retina AAAATGTTGT (5) 1.7 0.0017 P6.5 retina TCCCTTTGAG (4) 1.7 0.0017 P10.5 crx- retina AAAATGTTGT (5) 1.9 0.0019 P10.5 crx- retina TTTTGTCTTT (5) 1.9 0.0019 P10.5 crx+ retina TGGTGCCTCT (7) 3.8 0.0038 P10.5 crx+ retina AAAATGTTGT (5) 1.9 0.0019 P10.5 crx+ retina CCAGTCAGGT (5) 1.9 0.0019 P10.5 crx+ retina TTTTGTCTTT (5) 1.9 0.0019 Adult retinal TTTTGTCTTT (5) 3.7 0.0037 Adult retinal GACTTGGACA (3) 1.9 0.0019 ONL TTTTGTCTTT (5) 1.9 0.0019