Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292405	Za20d2	zinc finger, A20 domain containing 2	19	19 B (19 15.0 cM)	22682
Mm.292405	D14Mgi24	DNA Segment, Chr 14, Mouse Genome Informatics 24	14		105600
Mm.292405	5830475F03Rik	RIKEN cDNA 5830475F03 gene	19		76103
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

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SAGE Tags

Total 170 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTATTCAGCA (4) 6.5 0.0065 P8 Cb GC TGTGAGCCTG (5) 6.5 0.0065 P8 Cb GC TTTGCAGCAT (7) 6.5 0.0065 P8 Cb GC ACTTTTGGAA (10) 4.9 0.0049 P8 Cb GC CTTTTCAGCA (7) 4.9 0.0049 P8 Cb GC ATTATGTGCA (6) 1.6 0.0016 P8 Cb GC GCCATCTTCC (8) 1.6 0.0016 P8 Cb GC GCCATTTTCC (4) 1.6 0.0016 P8 Cb GC GGCTGCATTA (5) 1.6 0.0016 P8 Cb GC TAGTAATTTT (3) 1.6 0.0016 P8 Cb GC TTTGCAGCCA (7) 1.6 0.0016 Cb medulloblastoma CTATTCAGCA (4) 16.2 0.0162 Cb medulloblastoma TGTGAGCCTG (5) 6.9 0.0069 Cb medulloblastoma CTTTTCAGCA (7) 4.6 0.0046 Cb medulloblastoma ACTTTTGGAA (10) 2.3 0.0023 Cb medulloblastoma ATTATGTGCA (6) 2.3 0.0023 Cb medulloblastoma CTGTGTAGTC (4) 2.3 0.0023 Cb medulloblastoma TAGTAATTTT (3) 2.3 0.0023 Cb medulloblastoma TGAAGAGACT (4) 2.3 0.0023 Cb medulloblastoma TTTGCAGCAT (7) 2.3 0.0023 Cb medulloblastoma TTTGCAGCCA (7) 2.3 0.0023 P8 GC+1d culture CTATTCAGCA (4) 22.8 0.0228 P8 GC+1d culture CTTTTCAGCA (7) 19.4 0.0194 P8 GC+1d culture GCCATCTTCC (8) 8 0.008 P8 GC+1d culture TTTGCAGCCA (7) 8 0.008 P8 GC+1d culture TTTGCAGCAT (7) 6.8 0.0068 P8 GC+1d culture TGTGAGCCTG (5) 5.7 0.0057 P8 GC+1d culture GGCTGCATTA (5) 4.6 0.0046 P8 GC+1d culture GCCATTTTCC (4) 3.4 0.0034 P8 GC+1d culture CCTCACTTAA (8) 2.3 0.0023 P8 GC+1d culture TAATCTAGTG (5) 2.3 0.0023 P8 GC+1d culture TGCATCTTTT (6) 1.1 0.0011 P8 GC+SHH+1d culture CTATTCAGCA (4) 29.3 0.0293 P8 GC+SHH+1d culture CTTTTCAGCA (7) 14.1 0.0141 P8 GC+SHH+1d culture TTTGCAGCCA (7) 9.4 0.0094 P8 GC+SHH+1d culture TTTGCAGCAT (7) 7 0.007 P8 GC+SHH+1d culture GCCATCTTCC (8) 5.9 0.0059 P8 GC+SHH+1d culture CCTCACTTAA (8) 4.7 0.0047 P8 GC+SHH+1d culture GGCTGCATTA (5) 4.7 0.0047 P8 GC+SHH+1d culture GCCATTTTCC (4) 2.3 0.0023 P8 GC+SHH+1d culture ATTATGTGCA (6) 1.2 0.0012 P8 GC+SHH+1d culture GCCATTTTCA (6) 1.2 0.0012 P8 GC+SHH+1d culture TGAAGAGACT (4) 1.2 0.0012 3T3 fibroblasts CTTTTCAGCA (7) 14 0.014 3T3 fibroblasts TTTGCAGCCA (7) 10.5 0.0105 3T3 fibroblasts GCCATCTTCC (8) 7 0.007 3T3 fibroblasts GGCTGCATTA (5) 7 0.007 3T3 fibroblasts TAATCTAGTG (5) 3.5 0.0035 E15 cortex CTTTTCAGCA (7) 14.8 0.0148 E15 cortex ACAAGCCTGA (10) 4.9 0.0049 E15 cortex ACTTTTGGAA (10) 4.9 0.0049 E15 cortex CTATTCAGCA (4) 4.9 0.0049 E15 cortex GCCATCTTCC (8) 4.9 0.0049 E15 cortex TGCATCTTTT (6) 4.9 0.0049 E15 cortex TGTGAGCCTG (5) 4.9 0.0049 E15 cortex TTTGCAGCAT (7) 4.9 0.0049 E15 cortex TTTGCAGCCA (7) 4.9 0.0049 P1 cortex CTTTTCAGCA (7) 22.7 0.0227 P1 cortex CTATTCAGCA (4) 4.5 0.0045 P1 cortex GCCATCTTCC (8) 4.5 0.0045 Hypothalamus CTTTTCAGCA (7) 10.9 0.0109 Hypothalamus GCCATCTTCC (8) 5.4 0.0054 Hypothalamus ATTATGTGCA (6) 3.6 0.0036 Hypothalamus ACAAGCCTGA (10) 1.8 0.0018 Hypothalamus ACTTTTGGAA (10) 1.8 0.0018 Hypothalamus CCTCACTTAA (8) 1.8 0.0018 Hypothalamus CTATTCAGCA (4) 1.8 0.0018 Hypothalamus TGTGAGCCTG (5) 1.8 0.0018 Hypothalamus TTTGCAGCAT (7) 1.8 0.0018 E12.5 retina CTTTTCAGCA (7) 15 0.015 E12.5 retina CTATTCAGCA (4) 11.3 0.0113 E12.5 retina CCTCACTTAA (8) 9.4 0.0094 E12.5 retina ACTTTTGGAA (10) 3.8 0.0038 E12.5 retina GCCATCTTCC (8) 3.8 0.0038 E12.5 retina TAATCTAGTG (5) 3.8 0.0038 E12.5 retina TTTGCAGCAT (7) 3.8 0.0038 E12.5 retina TTTGCAGCCA (7) 3.8 0.0038 E12.5 retina ATTATGTGCA (6) 1.9 0.0019 E12.5 retina GCCATTTTCC (4) 1.9 0.0019 E12.5 retina GGCTGCATTA (5) 1.9 0.0019 E12.5 retina TGTGAGCCTG (5) 1.9 0.0019 E14.5 retina CTATTCAGCA (4) 12.8 0.0128 E14.5 retina CCTCACTTAA (8) 10.9 0.0109 E14.5 retina CTTTTCAGCA (7) 9.1 0.0091 E14.5 retina TGTGAGCCTG (5) 5.5 0.0055 E14.5 retina GGCTGCATTA (5) 3.6 0.0036 E14.5 retina GCCATCTTCC (8) 1.8 0.0018 E14.5 retina GCCATTTTCC (4) 1.8 0.0018 E14.5 retina TAATCTAGTG (5) 1.8 0.0018 E14.5 retina TGCATCTTTT (6) 1.8 0.0018 E14.5 retina TTTGCAGCAT (7) 1.8 0.0018 E14.5 retina TTTGCAGCCA (7) 1.8 0.0018 E16.5 retina CTATTCAGCA (4) 12.7 0.0127 E16.5 retina GGCTGCATTA (5) 10.9 0.0109 E16.5 retina CTTTTCAGCA (7) 7.2 0.0072 E16.5 retina GCCATCTTCC (8) 5.4 0.0054 E16.5 retina TGTGAGCCTG (5) 5.4 0.0054 E16.5 retina CCTCACTTAA (8) 3.6 0.0036 E16.5 retina TTTGCAGCCA (7) 3.6 0.0036 E16.5 retina CTGTGTAGTC (4) 1.8 0.0018 E18.5 retina CTATTCAGCA (4) 12.7 0.0127 E18.5 retina CCTCACTTAA (8) 7.3 0.0073 E18.5 retina CTTTTCAGCA (7) 5.5 0.0055 E18.5 retina GCCATCTTCC (8) 3.6 0.0036 E18.5 retina TTTGCAGCCA (7) 1.8 0.0018 P0.5 retina CTTTTCAGCA (7) 9.8 0.0098 P0.5 retina TGTGAGCCTG (5) 5.9 0.0059 P0.5 retina GCCATCTTCC (8) 3.9 0.0039 P0.5 retina TGTGGGGGTG (6) 3.9 0.0039 P0.5 retina ATTATGTGCA (6) 2 0.002 P0.5 retina CCTCACTTAA (8) 2 0.002 P0.5 retina CTATTCAGCA (4) 2 0.002 P0.5 retina CTGTGTAGTC (4) 2 0.002 P0.5 retina GGCTGCATTA (5) 2 0.002 P0.5 retina TTTGCAGCCA (7) 2 0.002 P2.5 retina TGTGAGCCTG (5) 15.8 0.0158 P2.5 retina CCTCACTTAA (8) 12.3 0.0123 P2.5 retina CTATTCAGCA (4) 8.8 0.0088 P2.5 retina CTTTTCAGCA (7) 8.8 0.0088 P2.5 retina GGCTGCATTA (5) 3.5 0.0035 P2.5 retina TTTGCAGCCA (7) 3.5 0.0035 P2.5 retina ACTTTTGGAA (10) 1.8 0.0018 P2.5 retina GCCATTTTCC (4) 1.8 0.0018 P2.5 retina TAATCTAGTG (5) 1.8 0.0018 P4.5 retina CCTCACTTAA (8) 21.8 0.0218 P4.5 retina CTATTCAGCA (4) 5.9 0.0059 P4.5 retina CTTTTCAGCA (7) 5.9 0.0059 P4.5 retina GCCATCTTCC (8) 4 0.004 P4.5 retina TTTGCAGCCA (7) 4 0.004 P4.5 retina ATTATGTGCA (6) 2 0.002 P4.5 retina TGTGAGCCTG (5) 2 0.002 P4.5 retina TGTGGGGGTG (6) 2 0.002 P4.5 retina TTTGCAGCAT (7) 2 0.002 P6.5 retina CCTCACTTAA (8) 13.3 0.0133 P6.5 retina CTATTCAGCA (4) 11.7 0.0117 P6.5 retina CTTTTCAGCA (7) 6.7 0.0067 P6.5 retina TGTGAGCCTG (5) 5 0.005 P6.5 retina TAATCTAGTG (5) 1.7 0.0017 P6.5 retina TTTGCAGCAT (7) 1.7 0.0017 P10.5 crx- retina CTATTCAGCA (4) 16.7 0.0167 P10.5 crx- retina CTTTTCAGCA (7) 5.6 0.0056 P10.5 crx- retina GCCATCTTCC (8) 3.7 0.0037 P10.5 crx- retina ACTTTTGGAA (10) 1.9 0.0019 P10.5 crx- retina CCTCACTTAA (8) 1.9 0.0019 P10.5 crx- retina GGCTGCATTA (5) 1.9 0.0019 P10.5 crx- retina TTTGCAGCAT (7) 1.9 0.0019 P10.5 crx- retina TTTGCAGCCA (7) 1.9 0.0019 P10.5 crx+ retina CTTTTCAGCA (7) 11.5 0.0115 P10.5 crx+ retina CTATTCAGCA (4) 7.7 0.0077 P10.5 crx+ retina CCTCACTTAA (8) 3.8 0.0038 P10.5 crx+ retina TAATCTAGTG (5) 3.8 0.0038 P10.5 crx+ retina GCCATCTTCC (8) 1.9 0.0019 P10.5 crx+ retina TGAAGAGACT (4) 1.9 0.0019 P10.5 crx+ retina TGTGAGCCTG (5) 1.9 0.0019 P10.5 crx+ retina TTTGCAGCAT (7) 1.9 0.0019 P10.5 crx+ retina TTTGCAGCCA (7) 1.9 0.0019 Adult retinal CTTTTCAGCA (7) 20.4 0.0204 Adult retinal ACAAGCCTGA (10) 5.6 0.0056 Adult retinal CTATTCAGCA (4) 5.6 0.0056 Adult retinal CCTCACTTAA (8) 3.7 0.0037 Adult retinal TTTGCAGCAT (7) 3.7 0.0037 Adult retinal GCCATCTTCC (8) 1.9 0.0019 ONL CTTTTCAGCA (7) 19.2 0.0192 ONL CCTCACTTAA (8) 7.7 0.0077 ONL CTATTCAGCA (4) 5.7 0.0057 ONL GCCATCTTCC (8) 3.8 0.0038 ONL TTTGCAGCCA (7) 3.8 0.0038 ONL ACAAGCCTGA (10) 1.9 0.0019 ONL GCCATTTTCC (4) 1.9 0.0019 ONL TTTGCAGCAT (7) 1.9 0.0019