Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292487	Thoc3	THO complex 3	13		73666
Gene Ontology	mRNA processing | mRNA-nucleus export | nuclear mRNA splicing, via spliceosome | nucleus | RNA binding | transport
Human Homolog	THOC3[THO complex 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACATTTATAA (3) 13.1 0.0131 P8 Cb GC GGAAATACTT (4) 4.9 0.0049 P8 Cb GC GCAGAGTTTG (3) 1.6 0.0016 Cb medulloblastoma GCAGAGTTTG (3) 6.9 0.0069 Cb medulloblastoma GCGGCGCCGC (4) 4.6 0.0046 Cb medulloblastoma ACATTTATAA (3) 2.3 0.0023 Cb medulloblastoma TTCTTCCTGA (4) 2.3 0.0023 P8 GC+1d culture GCGGCGCCGC (4) 5.7 0.0057 P8 GC+1d culture GGAAATACTT (4) 2.3 0.0023 P8 GC+1d culture GCAGAGTTTG (3) 1.1 0.0011 P8 GC+SHH+1d culture GCGGCGCCGC (4) 8.2 0.0082 P8 GC+SHH+1d culture GCAGAGTTTG (3) 4.7 0.0047 P8 GC+SHH+1d culture ACATTTATAA (3) 1.2 0.0012 3T3 fibroblasts GCGGCGCCGC (4) 24.5 0.0245 E15 cortex GCAGAGTTTG (3) 14.8 0.0148 E15 cortex GCGGCGCCGC (4) 9.9 0.0099 P1 cortex GCGGCGCCGC (4) 4.5 0.0045 Hypothalamus GCAGAGTTTG (3) 5.4 0.0054 Hypothalamus ACATTTATAA (3) 1.8 0.0018 Hypothalamus GGAAATACTT (4) 1.8 0.0018 E12.5 retina GCAGAGTTTG (3) 11.3 0.0113 E12.5 retina GCGGCGCCGC (4) 1.9 0.0019 E14.5 retina GCAGAGTTTG (3) 7.3 0.0073 E14.5 retina ACATTTATAA (3) 1.8 0.0018 E16.5 retina GCAGAGTTTG (3) 3.6 0.0036 E16.5 retina GGAAATACTT (4) 3.6 0.0036 E16.5 retina ACATTTATAA (3) 1.8 0.0018 E16.5 retina GCGGCGCCGC (4) 1.8 0.0018 E16.5 retina TTCTTCCTGA (4) 1.8 0.0018 E18.5 retina GCAGAGTTTG (3) 3.6 0.0036 E18.5 retina ACATTTATAA (3) 1.8 0.0018 E18.5 retina GGAAATACTT (4) 1.8 0.0018 P0.5 retina GCAGAGTTTG (3) 11.8 0.0118 P0.5 retina GCGGCGCCGC (4) 3.9 0.0039 P2.5 retina GCAGAGTTTG (3) 10.6 0.0106 P2.5 retina GGAAATACTT (4) 3.5 0.0035 P2.5 retina ACATTTATAA (3) 1.8 0.0018 P4.5 retina GCGGCGCCGC (4) 7.9 0.0079 P4.5 retina GGAAATACTT (4) 2 0.002 P6.5 retina GCGGCGCCGC (4) 6.7 0.0067 P6.5 retina GCAGAGTTTG (3) 3.3 0.0033 P10.5 crx- retina GCGGCGCCGC (4) 16.7 0.0167 P10.5 crx- retina ACATTTATAA (3) 5.6 0.0056 P10.5 crx- retina GCAGAGTTTG (3) 3.7 0.0037 P10.5 crx+ retina GCGGCGCCGC (4) 13.5 0.0135 P10.5 crx+ retina GCAGAGTTTG (3) 7.7 0.0077 P10.5 crx+ retina TTCTTCCTGA (4) 1.9 0.0019 Adult retinal GCGGCGCCGC (4) 13 0.013 Adult retinal GCAGAGTTTG (3) 1.9 0.0019 ONL GCGGCGCCGC (4) 13.4 0.0134 ONL GCAGAGTTTG (3) 9.6 0.0096