Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.292517	Farsla	phenylalanine-tRNA synthetase-like, alpha subunit	8		66590
Gene Ontology	ATP binding | cytoplasm | ligase activity | pathogenesis | phenylalanine-tRNA ligase activity | phenylalanyl-tRNA aminoacylation | protein biosynthesis | soluble fraction | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	FARSLA[phenylalanine-tRNA synthetase-like, alpha subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATATAGGCTG 1.6 0.0016 P8 Cb GC TTAGTGGATT (5) 1.6 0.0016 Cb medulloblastoma GCCACCACCA (9) 4.6 0.0046 Cb medulloblastoma ATATAGGCTG 2.3 0.0023 Cb medulloblastoma GTCTCACCCT (5) 2.3 0.0023 P8 GC+1d culture TTAGTGGATT (5) 3.4 0.0034 P8 GC+1d culture GTCTCACCCT (5) 1.1 0.0011 P8 GC+SHH+1d culture GTCTCACCCT (5) 1.2 0.0012 3T3 fibroblasts GTCTCACCCT (5) 17.5 0.0175 P1 cortex ATATAGGCTG 4.5 0.0045 Hypothalamus CAGCCTCCTG (5) 1.8 0.0018 E12.5 retina ATATAGGCTG 1.9 0.0019 E12.5 retina CAGCCTCCTG (5) 1.9 0.0019 E12.5 retina CCTTTTATCC (8) 1.9 0.0019 E14.5 retina GTCTCACCCT (5) 1.8 0.0018 E14.5 retina TTAGTGGATT (5) 1.8 0.0018 E16.5 retina CCTTTTATCC (8) 5.4 0.0054 E16.5 retina GTCTCACCCT (5) 3.6 0.0036 E16.5 retina TTAGTGGATT (5) 1.8 0.0018 E18.5 retina CAGCCTCCTG (5) 1.8 0.0018 P0.5 retina ATATAGGCTG 3.9 0.0039 P2.5 retina ATATAGGCTG 7 0.007 P6.5 retina ATATAGGCTG 3.3 0.0033 P6.5 retina GCCACCACCA (9) 3.3 0.0033 P6.5 retina CCTTTTATCC (8) 1.7 0.0017 P10.5 crx- retina TTAGTGGATT (5) 3.7 0.0037 P10.5 crx- retina ATATAGGCTG 1.9 0.0019 P10.5 crx+ retina TTAGTGGATT (5) 1.9 0.0019 Adult retinal ATATAGGCTG 3.7 0.0037 Adult retinal CCTTTTATCC (8) 1.9 0.0019 Adult retinal GTCTCACCCT (5) 1.9 0.0019 Adult retinal TTAGTGGATT (5) 1.9 0.0019 ONL CCTTTTATCC (8) 3.8 0.0038 ONL GTCTCACCCT (5) 1.9 0.0019