Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.292672
2210016L21Rik
RIKEN cDNA 2210016L21 gene
5
72357
Human Homolog
FLJ12448[hypothetical protein FLJ12448]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGCTTGGG
(
2
)
14.7
0.0147
Cb medulloblastoma
CAGGCTTGGG
(
2
)
25.4
0.0254
Cb medulloblastoma
AGGTGAACAG (
3
)
2.3
0.0023
P8 GC+1d culture
CAGGCTTGGG
(
2
)
10.3
0.0103
P8 GC+1d culture
AGGTGAACAG (
3
)
5.7
0.0057
P8 GC+1d culture
AGGTGAACCA
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGGCTTGGG
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
AGGTGAACAG (
3
)
3.5
0.0035
3T3 fibroblasts
CAGGCTTGGG
(
2
)
7
0.007
3T3 fibroblasts
AGGTGAACCA
(
6
)
3.5
0.0035
E15 cortex
CAGGCTTGGG
(
2
)
9.9
0.0099
P1 cortex
CAGGCTTGGG
(
2
)
22.7
0.0227
P1 cortex
AGGTGAACCA
(
6
)
4.5
0.0045
Hypothalamus
CAGGCTTGGG
(
2
)
39.8
0.0398
Hypothalamus
AGGTGAACAG (
3
)
7.2
0.0072
Hypothalamus
TTACAGACAA
1.8
0.0018
E12.5 retina
CAGGCTTGGG
(
2
)
9.4
0.0094
E14.5 retina
AGGTGAACAG (
3
)
3.6
0.0036
E14.5 retina
AGGTGAACCA
(
6
)
1.8
0.0018
E14.5 retina
CAGGCTTGGG
(
2
)
1.8
0.0018
E16.5 retina
CAGGCTTGGG
(
2
)
12.7
0.0127
E16.5 retina
AGGTGAACAG (
3
)
5.4
0.0054
E18.5 retina
CAGGCTTGGG
(
2
)
14.6
0.0146
E18.5 retina
AGGTGAACAG (
3
)
1.8
0.0018
P0.5 retina
CAGGCTTGGG
(
2
)
7.9
0.0079
P2.5 retina
CAGGCTTGGG
(
2
)
14.1
0.0141
P2.5 retina
AGGTGAACAG (
3
)
1.8
0.0018
P2.5 retina
AGGTGAACCA
(
6
)
1.8
0.0018
P4.5 retina
CAGGCTTGGG
(
2
)
15.9
0.0159
P6.5 retina
CAGGCTTGGG
(
2
)
6.7
0.0067
P6.5 retina
AGGTGAACAG (
3
)
3.3
0.0033
P6.5 retina
TTACAGACAA
3.3
0.0033
P10.5 crx- retina
CAGGCTTGGG
(
2
)
22.3
0.0223
P10.5 crx- retina
AGGTGAACAG (
3
)
1.9
0.0019
P10.5 crx+ retina
CAGGCTTGGG
(
2
)
28.8
0.0288
Adult retinal
CAGGCTTGGG
(
2
)
16.7
0.0167
Adult retinal
AGGTGAACCA
(
6
)
1.9
0.0019
ONL
CAGGCTTGGG
(
2
)
7.7
0.0077
