Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293117	Gtf2a2	general transcription factor II A, 2	9		235459
Gene Ontology	nucleus | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity | transcription factor TFIIA complex | transcription initiation from Pol II promoter
Human Homolog	GTF2A2[general transcription factor IIA, 2, 12kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGACTCTGTT 14.7 0.0147 P8 Cb GC TTTTCTCTTC (7) 4.9 0.0049 Cb medulloblastoma CGACTCTGTT 9.2 0.0092 Cb medulloblastoma TTTTCTCTTC (7) 2.3 0.0023 P8 GC+1d culture CGACTCTGTT 10.3 0.0103 P8 GC+1d culture TTTTCTCTTC (7) 6.8 0.0068 P8 GC+SHH+1d culture CGACTCTGTT 14.1 0.0141 P8 GC+SHH+1d culture TTTTCTCTTC (7) 3.5 0.0035 P8 GC+SHH+1d culture TATGTCTGTG (9) 2.3 0.0023 3T3 fibroblasts CGACTCTGTT 17.5 0.0175 3T3 fibroblasts TATGTCTGTG (9) 3.5 0.0035 E15 cortex CGACTCTGTT 24.7 0.0247 P1 cortex CGACTCTGTT 4.5 0.0045 P1 cortex TATGTCTGTG (9) 4.5 0.0045 Hypothalamus CGACTCTGTT 12.7 0.0127 Hypothalamus TATGTCTGTG (9) 3.6 0.0036 Hypothalamus TTTTCTCTTC (7) 1.8 0.0018 E12.5 retina CGACTCTGTT 22.5 0.0225 E12.5 retina TTTTCTCTTC (7) 1.9 0.0019 E14.5 retina CGACTCTGTT 10.9 0.0109 E14.5 retina TATGTCTGTG (9) 3.6 0.0036 E14.5 retina TTTTCTCTTC (7) 1.8 0.0018 E16.5 retina CGACTCTGTT 21.7 0.0217 E16.5 retina TTTTCTCTTC (7) 3.6 0.0036 E16.5 retina TATGTCTGTG (9) 1.8 0.0018 E18.5 retina CGACTCTGTT 5.5 0.0055 E18.5 retina TTTCTCTTCA (4) 1.8 0.0018 P0.5 retina CGACTCTGTT 13.7 0.0137 P0.5 retina TTTTCTCTTC (7) 2 0.002 P2.5 retina CGACTCTGTT 28.2 0.0282 P2.5 retina TTTTCTCTTC (7) 1.8 0.0018 P4.5 retina CGACTCTGTT 15.9 0.0159 P4.5 retina TTTCTCTTCA (4) 2 0.002 P6.5 retina CGACTCTGTT 20 0.02 P6.5 retina TATGTCTGTG (9) 3.3 0.0033 P6.5 retina TTTTCTCTTC (7) 1.7 0.0017 P10.5 crx- retina CGACTCTGTT 13 0.013 P10.5 crx+ retina CGACTCTGTT 19.2 0.0192 Adult retinal CGACTCTGTT 14.8 0.0148 Adult retinal TTTCTCTTCA (4) 1.9 0.0019 Adult retinal TTTTCTCTTC (7) 1.9 0.0019 ONL CGACTCTGTT 11.5 0.0115 ONL TATGTCTGTG (9) 3.8 0.0038 ONL TTTTCTCTTC (7) 1.9 0.0019