Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29344	Tde2	tumor differentially expressed 2	10		56442
Gene Ontology	integral to membrane | membrane | plasma membrane
Human Homolog	TDE2[tumor differentially expressed 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 160 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TTCCAGCCTT (2) 53.8 0.0538 P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CTCTTTCTTG (2) 8.2 0.0082 P8 Cb GC CTCTTCTGGC (4) 6.5 0.0065 P8 Cb GC AGGCCAGGAG (4) 1.6 0.0016 P8 Cb GC ATTTGACTGG (3) 1.6 0.0016 P8 Cb GC CTGGACCAGC (4) 1.6 0.0016 P8 Cb GC GCGATGTTAA 1.6 0.0016 P8 Cb GC GCGGGCGCCT 1.6 0.0016 P8 Cb GC TTCCATCCTT (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TTCCAGCCTT (2) 159.6 0.1596 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma TTCCATCCTT (3) 4.6 0.0046 Cb medulloblastoma CTCTTCTGGC (4) 2.3 0.0023 Cb medulloblastoma CTGGACAGCA (3) 2.3 0.0023 Cb medulloblastoma GCGATGTTAA 2.3 0.0023 Cb medulloblastoma GCGGGCGCCT 2.3 0.0023 Cb medulloblastoma TTCCACCCTT 2.3 0.0023 Cb medulloblastoma TTCTTGCTAA 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTCCAGCCTT (2) 83.3 0.0833 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture CTCTTTCTTG (2) 18.3 0.0183 P8 GC+1d culture ATTTGACTGG (3) 3.4 0.0034 P8 GC+1d culture TGTCTTTAAA (4) 2.3 0.0023 P8 GC+1d culture AGTCCACTTT (3) 1.1 0.0011 P8 GC+1d culture ATTAAATATG (2) 1.1 0.0011 P8 GC+1d culture CTGGACAGCA (3) 1.1 0.0011 P8 GC+1d culture TGGGATAAAA (7) 1.1 0.0011 P8 GC+1d culture TTCCATCCTT (3) 1.1 0.0011 P8 GC+1d culture TTCTTGCTAA 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TTCCAGCCTT (2) 65.6 0.0656 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CTCTTTCTTG (2) 10.5 0.0105 P8 GC+SHH+1d culture AGGCCAGGAG (4) 1.2 0.0012 P8 GC+SHH+1d culture AGTCCACTTT (3) 1.2 0.0012 P8 GC+SHH+1d culture ATTTGACTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCCACCCTT 1.2 0.0012 P8 GC+SHH+1d culture TTTGGATAAA (2) 1.2 0.0012 3T3 fibroblasts ATTTGACTGG (3) 49.1 0.0491 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CTGGACAGCA (3) 7 0.007 3T3 fibroblasts TTCCAGCCTT (2) 7 0.007 3T3 fibroblasts AGTCCACTTT (3) 3.5 0.0035 3T3 fibroblasts CTGGACCAGC (4) 3.5 0.0035 3T3 fibroblasts GTCTGCTATG (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex TTCCAGCCTT (2) 34.6 0.0346 E15 cortex TTCTTGCTAA 9.9 0.0099 E15 cortex ATTTGACTGG (3) 4.9 0.0049 E15 cortex CTCTTTCTTG (2) 4.9 0.0049 E15 cortex CTGGACCAGC (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TTCCAGCCTT (2) 40.9 0.0409 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex ATTTGACTGG (3) 13.6 0.0136 P1 cortex CTCTTTCTTG (2) 9.1 0.0091 Hypothalamus TTCCAGCCTT (2) 125 0.125 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus ATTAAATATG (2) 1.8 0.0018 Hypothalamus CTCTTTCTTG (2) 1.8 0.0018 Hypothalamus CTGGACAGCA (3) 1.8 0.0018 Hypothalamus GCGATGTTAA 1.8 0.0018 Hypothalamus GCGGGCGCCT 1.8 0.0018 Hypothalamus TTTCTTGCTA (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina TTCCAGCCTT (2) 22.5 0.0225 E12.5 retina AGGCCAGGAG (4) 3.8 0.0038 E12.5 retina CTCTTTCTTG (2) 3.8 0.0038 E12.5 retina CTGGACCAGC (4) 1.9 0.0019 E12.5 retina TTCTTGCTAA 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTCCAGCCTT (2) 47.4 0.0474 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina AAATTCATAA 1.8 0.0018 E14.5 retina AGGCCAGGAG (4) 1.8 0.0018 E14.5 retina ATTTGACTGG (3) 1.8 0.0018 E14.5 retina CTCTTTCTTG (2) 1.8 0.0018 E14.5 retina CTGGACAGCA (3) 1.8 0.0018 E14.5 retina TGTCTTTAAA (4) 1.8 0.0018 E16.5 retina TTCCAGCCTT (2) 45.3 0.0453 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CTCTTCTGGC (4) 7.2 0.0072 E16.5 retina CTCTTTCTTG (2) 5.4 0.0054 E16.5 retina CTGGACAGCA (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina TTCCAGCCTT (2) 41.8 0.0418 E18.5 retina CTCTTTCTTG (2) 12.7 0.0127 E18.5 retina CTCTTCTGGC (4) 3.6 0.0036 E18.5 retina GTCTGCTATG (2) 1.8 0.0018 E18.5 retina TTCCATCCTT (3) 1.8 0.0018 E18.5 retina TTTCTTGCTA (2) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TTCCAGCCTT (2) 19.6 0.0196 P0.5 retina CTCTTTCTTG (2) 15.7 0.0157 P0.5 retina GTCTGCTATG (2) 2 0.002 P0.5 retina TTTCTTGCTA (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TTCCAGCCTT (2) 58.1 0.0581 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CTCTTTCTTG (2) 26.4 0.0264 P2.5 retina ATTTGACTGG (3) 5.3 0.0053 P2.5 retina ATTAAATATG (2) 1.8 0.0018 P2.5 retina GCGGGCGCCT 1.8 0.0018 P2.5 retina GTCTGCTATG (2) 1.8 0.0018 P2.5 retina TGTCTTTAAA (4) 1.8 0.0018 P2.5 retina TTCTTGCTAA 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TTCCAGCCTT (2) 53.5 0.0535 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CTCTTTCTTG (2) 31.7 0.0317 P4.5 retina CTCTTCTGGC (4) 4 0.004 P4.5 retina AGGCCAGGAG (4) 2 0.002 P4.5 retina TGGGATAAAA (7) 2 0.002 P4.5 retina TGTCTTTAAA (4) 2 0.002 P4.5 retina TTCCATCCTT (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TTCCAGCCTT (2) 53.4 0.0534 P6.5 retina CTCTTTCTTG (2) 45 0.045 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina TTCCATCCTT (3) 6.7 0.0067 P6.5 retina ATTTGACTGG (3) 1.7 0.0017 P6.5 retina TGGGATAAAA (7) 1.7 0.0017 P10.5 crx- retina TTCCAGCCTT (2) 94.7 0.0947 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CTCTTTCTTG (2) 37.2 0.0372 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina ATTTGACTGG (3) 3.7 0.0037 P10.5 crx- retina AGGCCAGGAG (4) 1.9 0.0019 P10.5 crx- retina TTCCATCCTT (3) 1.9 0.0019 P10.5 crx- retina TTTCTTGCTA (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TTCCAGCCTT (2) 80.7 0.0807 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CTCTTTCTTG (2) 28.8 0.0288 P10.5 crx+ retina TTTGGATAAA (2) 3.8 0.0038 P10.5 crx+ retina ATTTGACTGG (3) 1.9 0.0019 P10.5 crx+ retina TTCCATCCTT (3) 1.9 0.0019 P10.5 crx+ retina TTCTTGCTAA 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TTCCAGCCTT (2) 50 0.05 Adult retinal CTCTTTCTTG (2) 31.5 0.0315 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal TTCCACCCTT 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CTCTTTCTTG (2) 21.1 0.0211 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL AAATTCATAA 5.7 0.0057 ONL TTCCAGCCTT (2) 5.7 0.0057 ONL AGGCCAGGAG (4) 3.8 0.0038 ONL TTCTTGCTAA 1.9 0.0019