Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293510	Sec5l1	SEC5-like 1 (S. cerevisiae)	13		66482
Gene Ontology	exocyst | exocytosis | positive regulation of exocytosis | protein transport | Ral interactor activity | transport
Human Homolog	SEC5L1[SEC5-like 1 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACAGAAAT (3) 3.3 0.0033 P8 Cb GC GATCCTTCTA (5) 3.3 0.0033 P8 Cb GC TGCACAATAA (4) 3.3 0.0033 P8 Cb GC GTGACCTGGC (3) 1.6 0.0016 Cb medulloblastoma GTGACCTGGC (3) 173.4 0.1734 Cb medulloblastoma ACACAGAAAT (3) 25.4 0.0254 Cb medulloblastoma GATCCTTCTA (5) 2.3 0.0023 Cb medulloblastoma GCGGTGGAGA 2.3 0.0023 Cb medulloblastoma TCTCGATCCC (6) 2.3 0.0023 P8 GC+1d culture GATCCTTCTA (5) 4.6 0.0046 P8 GC+1d culture GTGACCTGGC (3) 3.4 0.0034 P8 GC+1d culture ACACAGAAAT (3) 2.3 0.0023 P8 GC+1d culture GGCTGTGTTT (2) 2.3 0.0023 P8 GC+1d culture GCGGTGGAGA 1.1 0.0011 P8 GC+1d culture TAGGGTTGAA (2) 1.1 0.0011 P8 GC+1d culture TCTCGATCCC (6) 1.1 0.0011 P8 GC+1d culture TGCACAATAA (4) 1.1 0.0011 P8 GC+SHH+1d culture GTGACCTGGC (3) 5.9 0.0059 P8 GC+SHH+1d culture ACACAGAAAT (3) 3.5 0.0035 P8 GC+SHH+1d culture GATCCTTCTA (5) 2.3 0.0023 P8 GC+SHH+1d culture GGCTGTGTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGTGTGTGT (10) 1.2 0.0012 3T3 fibroblasts GGCTGTGTTT (2) 3.5 0.0035 3T3 fibroblasts GGTGTGTGTG (8) 3.5 0.0035 3T3 fibroblasts TCTCGATCCC (6) 3.5 0.0035 3T3 fibroblasts TGCACAATAA (4) 3.5 0.0035 E15 cortex GTGTGTGTGT (10) 4.9 0.0049 P1 cortex GTGACCTGGC (3) 9.1 0.0091 Hypothalamus GTGACCTGGC (3) 248.1 0.2481 Hypothalamus ACACAGAAAT (3) 21.7 0.0217 Hypothalamus GATCCTTCTA (5) 3.6 0.0036 Hypothalamus GTGTGTGTGT (10) 1.8 0.0018 Hypothalamus TGCACAATAA (4) 1.8 0.0018 E12.5 retina ACACAGAAAT (3) 3.8 0.0038 E12.5 retina GATCCTTCTA (5) 3.8 0.0038 E12.5 retina GTGACCTGGC (3) 1.9 0.0019 E14.5 retina ACACAGAAAT (3) 23.7 0.0237 E14.5 retina GATCCTTCTA (5) 7.3 0.0073 E14.5 retina GCGGTGGAGA 1.8 0.0018 E14.5 retina GGTGTGTGTG (8) 1.8 0.0018 E16.5 retina ACACAGAAAT (3) 9.1 0.0091 E16.5 retina GATCCTTCTA (5) 7.2 0.0072 E16.5 retina GGTGTGTGTG (8) 1.8 0.0018 E16.5 retina TAGGGTTGAA (2) 1.8 0.0018 E16.5 retina TGCACAATAA (4) 1.8 0.0018 E18.5 retina ACACAGAAAT (3) 18.2 0.0182 E18.5 retina GATCCTTCTA (5) 3.6 0.0036 E18.5 retina TAGGGTTGAA (2) 3.6 0.0036 E18.5 retina GCGGTGGAGA 1.8 0.0018 P0.5 retina ACACAGAAAT (3) 3.9 0.0039 P0.5 retina GTGACCTGGC (3) 3.9 0.0039 P0.5 retina GTGTGTGTGT (10) 2 0.002 P2.5 retina ACACAGAAAT (3) 7 0.007 P2.5 retina GATCCTTCTA (5) 5.3 0.0053 P2.5 retina TAGGGTTGAA (2) 1.8 0.0018 P2.5 retina TGCACAATAA (4) 1.8 0.0018 P4.5 retina ACACAGAAAT (3) 11.9 0.0119 P4.5 retina GTGACCTGGC (3) 9.9 0.0099 P4.5 retina GATCCTTCTA (5) 4 0.004 P4.5 retina GTGTGTGTGT (10) 2 0.002 P4.5 retina TAGGGTTGAA (2) 2 0.002 P6.5 retina GCGGTGGAGA 5 0.005 P6.5 retina GTGACCTGGC (3) 5 0.005 P6.5 retina GATCCTTCTA (5) 3.3 0.0033 P6.5 retina ACACAGAAAT (3) 1.7 0.0017 P10.5 crx- retina ACACAGAAAT (3) 20.4 0.0204 P10.5 crx- retina GTGACCTGGC (3) 5.6 0.0056 P10.5 crx- retina GATCCTTCTA (5) 3.7 0.0037 P10.5 crx+ retina GTGACCTGGC (3) 11.5 0.0115 P10.5 crx+ retina ACACAGAAAT (3) 5.8 0.0058 P10.5 crx+ retina GATCCTTCTA (5) 1.9 0.0019 P10.5 crx+ retina GGTGTGTGTG (8) 1.9 0.0019 Adult retinal ACACAGAAAT (3) 7.4 0.0074 Adult retinal GTGACCTGGC (3) 5.6 0.0056 Adult retinal GATCCTTCTA (5) 1.9 0.0019 Adult retinal GGTGTGTGTG (8) 1.9 0.0019 ONL GTGACCTGGC (3) 3.8 0.0038 ONL ACACAGAAAT (3) 1.9 0.0019 ONL GATCCTTCTA (5) 1.9 0.0019 ONL GTGTGTGTGT (10) 1.9 0.0019