Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.293716	Nipsnap1	4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)	11	4 23.1 cM	18082
Gene Ontology	biological_process unknown | mitochondrion | molecular_function unknown
Human Homolog	NIPSNAP1[nipsnap homolog 1 (C. elegans)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTGTGCTAC 6.5 0.0065 Cb medulloblastoma ACTGGCTGTT 6.9 0.0069 Cb medulloblastoma GTTGTGCTAC 2.3 0.0023 P8 GC+1d culture GTTGTGCTAC 8 0.008 P8 GC+1d culture ACTGGCTGTT 4.6 0.0046 P8 GC+1d culture GTTGGTGCTA (5) 1.1 0.0011 P8 GC+1d culture TCTACTACAG (4) 1.1 0.0011 P8 GC+SHH+1d culture GTTGTGCTAC 8.2 0.0082 P8 GC+SHH+1d culture GAAACGCCTC 2.3 0.0023 P8 GC+SHH+1d culture TCTACTACAG (4) 2.3 0.0023 P8 GC+SHH+1d culture ACTGGCTGTT 1.2 0.0012 P8 GC+SHH+1d culture GTTGGTGCTA (5) 1.2 0.0012 3T3 fibroblasts ACTGGCTGTT 3.5 0.0035 3T3 fibroblasts GTTGGTGCTA (5) 3.5 0.0035 3T3 fibroblasts TCTACTACAG (4) 3.5 0.0035 E15 cortex ACTGGCTGTT 4.9 0.0049 P1 cortex ACTGGCTGTT 4.5 0.0045 Hypothalamus GTTGTGCTAC 3.6 0.0036 Hypothalamus ACTGGCTGTT 1.8 0.0018 Hypothalamus TCTACTACAG (4) 1.8 0.0018 E12.5 retina ACTGGCTGTT 7.5 0.0075 E12.5 retina GTTGTGCTAC 7.5 0.0075 E12.5 retina TCTACTACAG (4) 1.9 0.0019 E14.5 retina TCTACTACAG (4) 1.8 0.0018 E16.5 retina TCTACTACAG (4) 5.4 0.0054 E16.5 retina ACTGGCTGTT 1.8 0.0018 E16.5 retina GTTGGTGCTA (5) 1.8 0.0018 E16.5 retina GTTGTGCTAC 1.8 0.0018 E18.5 retina GTTGTGCTAC 3.6 0.0036 E18.5 retina ACTGGCTGTT 1.8 0.0018 E18.5 retina GAAACGCCTC 1.8 0.0018 P0.5 retina TCTACTACAG (4) 7.9 0.0079 P0.5 retina GTTGTGCTAC 2 0.002 P2.5 retina GTTGTGCTAC 7 0.007 P2.5 retina TCTACTACAG (4) 5.3 0.0053 P2.5 retina ACTGGCTGTT 1.8 0.0018 P2.5 retina GTTGGTGCTA (5) 1.8 0.0018 P4.5 retina GTTGTGCTAC 7.9 0.0079 P4.5 retina TCTACTACAG (4) 5.9 0.0059 P6.5 retina GTTGTGCTAC 5 0.005 P6.5 retina TCTACTACAG (4) 5 0.005 P6.5 retina ACTGGCTGTT 3.3 0.0033 P10.5 crx- retina GTTGGTGCTA (5) 3.7 0.0037 P10.5 crx- retina ACTGGCTGTT 1.9 0.0019 P10.5 crx- retina TCTACTACAG (4) 1.9 0.0019 P10.5 crx+ retina GTTGTGCTAC 7.7 0.0077 P10.5 crx+ retina ACTGGCTGTT 1.9 0.0019 P10.5 crx+ retina TCTACTACAG (4) 1.9 0.0019 Adult retinal ACTGGCTGTT 1.9 0.0019 Adult retinal TCTACTACAG (4) 1.9 0.0019 ONL TCTACTACAG (4) 5.7 0.0057 ONL GTTGTGCTAC 1.9 0.0019