Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294138	Ppp2r1a	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	17		51792
Gene Ontology	cytosol | phosphoprotein phosphatase activity | protein binding
Human Homolog	PPP2R1A[protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTGGTGT (3) 34.3 0.0343 P8 Cb GC TTTTTTGTGT 14.7 0.0147 P8 Cb GC AACTCTGCCT (5) 3.3 0.0033 P8 Cb GC GTGTGAAATA (2) 3.3 0.0033 P8 Cb GC ATTATGTGCA (6) 1.6 0.0016 P8 Cb GC CACAGGCAGT (3) 1.6 0.0016 P8 Cb GC TGCATTTATT 1.6 0.0016 Cb medulloblastoma TTTTTTGTGT 30.1 0.0301 Cb medulloblastoma TTTTTGGTGT (3) 18.5 0.0185 Cb medulloblastoma TTTGGTGTGT (4) 4.6 0.0046 Cb medulloblastoma AGCAACTCAA 2.3 0.0023 Cb medulloblastoma ATTATGTGCA (6) 2.3 0.0023 Cb medulloblastoma GTGTGAAATA (2) 2.3 0.0023 Cb medulloblastoma TGTTTGTGTG (10) 2.3 0.0023 P8 GC+1d culture TTTTTTGTGT 28.5 0.0285 P8 GC+1d culture TTTTTGGTGT (3) 27.4 0.0274 P8 GC+1d culture TGTGAATATT (3) 2.3 0.0023 P8 GC+1d culture AGCAACTCAA 1.1 0.0011 P8 GC+1d culture CACAGGGAGT 1.1 0.0011 P8 GC+1d culture GTCTGACCCC 1.1 0.0011 P8 GC+1d culture GTGTGAAATA (2) 1.1 0.0011 P8 GC+1d culture TGCATTTATT 1.1 0.0011 P8 GC+SHH+1d culture TTTTTGGTGT (3) 31.6 0.0316 P8 GC+SHH+1d culture TTTTTTGTGT 26.9 0.0269 P8 GC+SHH+1d culture GTGTGAAATA (2) 5.9 0.0059 P8 GC+SHH+1d culture GTCTGACCCC 3.5 0.0035 P8 GC+SHH+1d culture TGCATTTATT 2.3 0.0023 P8 GC+SHH+1d culture TGTGAATATT (3) 2.3 0.0023 P8 GC+SHH+1d culture TTTTTTTGTG (6) 2.3 0.0023 P8 GC+SHH+1d culture ATTATGTGCA (6) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTGTGTG (3) 1.2 0.0012 3T3 fibroblasts AACTCTGCCT (5) 3.5 0.0035 3T3 fibroblasts GTTGGGGTTG (2) 3.5 0.0035 3T3 fibroblasts TTTTTGGTGT (3) 3.5 0.0035 3T3 fibroblasts TTTTTTGTGT 3.5 0.0035 P1 cortex TTTTTTGTGT 45.5 0.0455 P1 cortex TTTTTGGTGT (3) 13.6 0.0136 Hypothalamus TTTTTGGTGT (3) 29 0.029 Hypothalamus TTTTTTGTGT 25.4 0.0254 Hypothalamus GTTGGGGTTG (2) 5.4 0.0054 Hypothalamus ATTATGTGCA (6) 3.6 0.0036 Hypothalamus CTGCCCACAG (8) 1.8 0.0018 Hypothalamus TCAGAGTGAG (5) 1.8 0.0018 Hypothalamus TGTTTGTGTG (10) 1.8 0.0018 Hypothalamus TTTGGTGTGT (4) 1.8 0.0018 E12.5 retina TTTTTTGTGT 35.7 0.0357 E12.5 retina TTTTTGGTGT (3) 22.5 0.0225 E12.5 retina GTGTGAAATA (2) 11.3 0.0113 E12.5 retina AACTCTGCCT (5) 1.9 0.0019 E12.5 retina ATTATGTGCA (6) 1.9 0.0019 E12.5 retina CACAGGCAGT (3) 1.9 0.0019 E12.5 retina GGGAGGGGGC (4) 1.9 0.0019 E14.5 retina TTTTTGGTGT (3) 36.4 0.0364 E14.5 retina TTTTTTGTGT 34.6 0.0346 E14.5 retina GTGTGAAATA (2) 1.8 0.0018 E14.5 retina GTTGGGGTTG (2) 1.8 0.0018 E14.5 retina TGTGAATATT (3) 1.8 0.0018 E14.5 retina TGTTTGTGTG (10) 1.8 0.0018 E14.5 retina TTTGGTGTGT (4) 1.8 0.0018 E16.5 retina TTTTTTGTGT 38 0.038 E16.5 retina TTTTTGGTGT (3) 25.4 0.0254 E16.5 retina AACTCTGCCT (5) 3.6 0.0036 E16.5 retina CTGCCCACAG (8) 1.8 0.0018 E16.5 retina GTGTGAAATA (2) 1.8 0.0018 E16.5 retina GTTGGGGTTG (2) 1.8 0.0018 E16.5 retina TGTGAATATT (3) 1.8 0.0018 E18.5 retina TTTTTTGTGT 23.6 0.0236 E18.5 retina TTTTTGGTGT (3) 21.8 0.0218 E18.5 retina GTGTGAAATA (2) 5.5 0.0055 E18.5 retina AGCAACTCAA 1.8 0.0018 P0.5 retina TTTTTGGTGT (3) 33.4 0.0334 P0.5 retina TTTTTTGTGT 9.8 0.0098 P0.5 retina AACTCTGCCT (5) 3.9 0.0039 P0.5 retina TTTTTGTGTG (3) 3.9 0.0039 P0.5 retina ATTATGTGCA (6) 2 0.002 P0.5 retina CACAGGGAGT 2 0.002 P0.5 retina TTTGGTGTGT (4) 2 0.002 P0.5 retina TTTTTTTGTG (6) 2 0.002 P2.5 retina TTTTTGGTGT (3) 33.4 0.0334 P2.5 retina TTTTTTGTGT 26.4 0.0264 P2.5 retina GTGTGAAATA (2) 8.8 0.0088 P2.5 retina AACTCTGCCT (5) 1.8 0.0018 P2.5 retina GGGAGGGGGC (4) 1.8 0.0018 P2.5 retina TGTTTGTGTG (10) 1.8 0.0018 P4.5 retina TTTTTGGTGT (3) 45.6 0.0456 P4.5 retina TTTTTTGTGT 29.7 0.0297 P4.5 retina GTGTGAAATA (2) 7.9 0.0079 P4.5 retina ATTATGTGCA (6) 2 0.002 P4.5 retina GGGAGGGGGC (4) 2 0.002 P4.5 retina TCAGAGTGAG (5) 2 0.002 P4.5 retina TGTGAATATT (3) 2 0.002 P4.5 retina TGTTTGTGTG (10) 2 0.002 P6.5 retina TTTTTTGTGT 36.7 0.0367 P6.5 retina TTTTTGGTGT (3) 35 0.035 P6.5 retina GTGTGAAATA (2) 5 0.005 P6.5 retina TCAGAGTGAG (5) 1.7 0.0017 P6.5 retina TGTTTGTGTG (10) 1.7 0.0017 P6.5 retina TTTTTGTGTG (3) 1.7 0.0017 P10.5 crx- retina TTTTTGGTGT (3) 39 0.039 P10.5 crx- retina TTTTTTGTGT 27.9 0.0279 P10.5 crx- retina TGTGAATATT (3) 3.7 0.0037 P10.5 crx- retina CACAGGGAGT 1.9 0.0019 P10.5 crx- retina CTGCCCACAG (8) 1.9 0.0019 P10.5 crx- retina TGCATTTATT 1.9 0.0019 P10.5 crx+ retina TTTTTGGTGT (3) 26.9 0.0269 P10.5 crx+ retina TTTTTTGTGT 21.1 0.0211 P10.5 crx+ retina GTGTGAAATA (2) 5.8 0.0058 P10.5 crx+ retina TGTGAATATT (3) 3.8 0.0038 P10.5 crx+ retina CACAGGCAGT (3) 1.9 0.0019 P10.5 crx+ retina GTTGGGGTTG (2) 1.9 0.0019 P10.5 crx+ retina TTTGGTGTGT (4) 1.9 0.0019 P10.5 crx+ retina TTTTTTTGTG (6) 1.9 0.0019 Adult retinal TTTTTGGTGT (3) 24.1 0.0241 Adult retinal TTTTTTGTGT 22.2 0.0222 Adult retinal GTGTGAAATA (2) 5.6 0.0056 Adult retinal TTTGGTGTGT (4) 1.9 0.0019 ONL TTTTTGGTGT (3) 11.5 0.0115 ONL TTTTTTGTGT 7.7 0.0077 ONL GTGTGAAATA (2) 5.7 0.0057 ONL GGGAGGGGGC (4) 3.8 0.0038 ONL GTTGGGGTTG (2) 1.9 0.0019 ONL TTTTTTTGTG (6) 1.9 0.0019