Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.294695
2410018C17Rik
RIKEN cDNA 2410018C17 gene
5
74504
Gene Ontology
nucleus
Human Homolog
LOC152877[similar to RIKEN cDNA 5430419M09]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
ATTCTGCCTA
(
2
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
ATTCTGCCTA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
ATTCTGCCTA
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
TTTAATATAA (
4
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
ATTCTGCCTA
(
2
)
5.4
0.0054
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
ATTCTGCCTA
(
2
)
5.6
0.0056
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
ATTCTGCCTA
(
2
)
5.5
0.0055
E14.5 retina
TTTAATAAAA (
13
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
ATTCTGCCTA
(
2
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
ATTCTGCCTA
(
2
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
ATTCTGCCTA
(
2
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
ATTCTGCCTA
(
2
)
5.3
0.0053
P2.5 retina
TTTAATATAA (
4
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TTTAATAAAA (
13
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
ATTCTGCCTA
(
2
)
6.7
0.0067
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
ATTCTGCCTA
(
2
)
1.9
0.0019
P10.5 crx- retina
TTTAATATAA (
4
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
ATTCTGCCTA
(
2
)
5.8
0.0058
P10.5 crx+ retina
TTTAATAAAA (
13
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
ATTCTGCCTA
(
2
)
3.7
0.0037
Adult retinal
TTTAATAAAA (
13
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
