Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29473	Copz1	coatomer protein complex, subunit zeta 1	15	15 6.0 cM	56447
Gene Ontology	clathrin vesicle coat | COPI vesicle coat | COPI-coated vesicle | Golgi apparatus | intracellular protein transport | membrane | protein transport | protein transporter activity | transport
Human Homolog	COPZ1[coatomer protein complex, subunit zeta 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACTGGCTGA 9.8 0.0098 P8 Cb GC ATGGCGGAGG (3) 3.3 0.0033 Cb medulloblastoma CACTGGCTGA 4.6 0.0046 Cb medulloblastoma GGCCAGAATG (3) 2.3 0.0023 P8 GC+1d culture CACTGGCTGA 17.1 0.0171 P8 GC+1d culture ATGGCGGAGG (3) 2.3 0.0023 P8 GC+1d culture CACTGGGCTG (6) 1.1 0.0011 P8 GC+SHH+1d culture CACTGGCTGA 15.2 0.0152 P8 GC+SHH+1d culture ATGGCGGAGG (3) 2.3 0.0023 P8 GC+SHH+1d culture GGCCAGAATG (3) 1.2 0.0012 3T3 fibroblasts CACTGGCTGA 7 0.007 E15 cortex CACTGGCTGA 19.8 0.0198 P1 cortex CACTGGCTGA 9.1 0.0091 Hypothalamus CACTGGCTGA 5.4 0.0054 Hypothalamus CACTGGGCTG (6) 1.8 0.0018 Hypothalamus GGGCAGAATG (3) 1.8 0.0018 E12.5 retina ATGGCGGAGG (3) 13.1 0.0131 E12.5 retina CACTGGCTGA 13.1 0.0131 E12.5 retina CACTGGGCTG (6) 1.9 0.0019 E14.5 retina CACTGGCTGA 9.1 0.0091 E14.5 retina ATGGCGGAGG (3) 3.6 0.0036 E14.5 retina GCATACTGTT (10) 1.8 0.0018 E16.5 retina CACTGGCTGA 9.1 0.0091 E16.5 retina ATGGCGGAGG (3) 3.6 0.0036 E16.5 retina GGCCAGAATG (3) 3.6 0.0036 E16.5 retina CACTGGGCTG (6) 1.8 0.0018 E16.5 retina GCATACTGTT (10) 1.8 0.0018 E18.5 retina CACTGGCTGA 10.9 0.0109 E18.5 retina ATGGCGGAGG (3) 7.3 0.0073 E18.5 retina CACTGGGCTG (6) 1.8 0.0018 E18.5 retina GGCCAGAATG (3) 1.8 0.0018 E18.5 retina GGGCAGAATG (3) 1.8 0.0018 P0.5 retina CACTGGCTGA 19.6 0.0196 P0.5 retina ATGGCGGAGG (3) 13.7 0.0137 P2.5 retina CACTGGCTGA 10.6 0.0106 P2.5 retina ATGGCGGAGG (3) 1.8 0.0018 P2.5 retina CCCTGGCTGA (10) 1.8 0.0018 P4.5 retina CACTGGCTGA 15.9 0.0159 P4.5 retina GGCCAGAATG (3) 4 0.004 P4.5 retina ATGGCGGAGG (3) 2 0.002 P4.5 retina CACTGGGCTG (6) 2 0.002 P6.5 retina CACTGGCTGA 11.7 0.0117 P6.5 retina GGCCAGAATG (3) 3.3 0.0033 P6.5 retina ATGGCGGAGG (3) 1.7 0.0017 P6.5 retina CACTGGGCTG (6) 1.7 0.0017 P6.5 retina GCATACTGTT (10) 1.7 0.0017 P6.5 retina GGGCAGAATG (3) 1.7 0.0017 P10.5 crx- retina CACTGGCTGA 20.4 0.0204 P10.5 crx- retina ATGGCGGAGG (3) 1.9 0.0019 P10.5 crx+ retina CACTGGCTGA 17.3 0.0173 P10.5 crx+ retina ATGGCGGAGG (3) 1.9 0.0019 P10.5 crx+ retina GGGCAGAATG (3) 1.9 0.0019 Adult retinal CACTGGCTGA 14.8 0.0148 Adult retinal CCCTGGCTGA (10) 3.7 0.0037 Adult retinal CACTGGGCTG (6) 1.9 0.0019 ONL ATGGCGGAGG (3) 1.9 0.0019 ONL CACTGGCTGA 1.9 0.0019 ONL CACTGGGCTG (6) 1.9 0.0019