Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294761	Vps18	vacuolar protein sorting 18 (yeast)	2		228545
Gene Ontology	membrane | protein transport | transport
Human Homolog	VPS18[vacuolar protein sorting protein 18]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GGCAACGAGA (2) 2.3 0.0023 Cb medulloblastoma TGGAGATGCT (4) 2.3 0.0023 Cb medulloblastoma TGGGCACAGA (3) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture CTTCCTGCCA (5) 1.1 0.0011 P8 GC+1d culture TGGAGATGCT (4) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture TGGAGATGCT (4) 2.3 0.0023 P8 GC+SHH+1d culture TGGGCACAGA (3) 2.3 0.0023 P8 GC+SHH+1d culture CAGGCAGGCA (6) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CAGGCAGGCA (6) 7 0.007 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TGGAGATGCT (4) 4.9 0.0049 E15 cortex TGGGCACAGA (3) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus CAGGCAGGCA (6) 1.8 0.0018 Hypothalamus CTTCCTGCCA (5) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TGGGCACAGA (3) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TGGGCACAGA (3) 3.5 0.0035 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina CAGGCAGGCA (6) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TGGGCACAGA (3) 3.3 0.0033 P6.5 retina GGCAACGAGA (2) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina CAGGCAGGCA (6) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TGGGCACAGA (3) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TGGAGATGCT (4) 7.4 0.0074 Adult retinal CAGGCAGGCA (6) 1.9 0.0019 Adult retinal GGCAACGAGA (2) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL TGGAGATGCT (4) 5.7 0.0057 ONL CAGGCAGGCA (6) 3.8 0.0038 ONL TGGGCACAGA (3) 1.9 0.0019