Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.294770
1500002C15Rik
RIKEN cDNA 1500002C15 gene
4
68946
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 109 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTGCCCTG
(
2
)
13.1
0.0131
P8 Cb GC
CCCTGCCCTG (
8
)
4.9
0.0049
P8 Cb GC
TCTCTAAAAA (
7
)
4.9
0.0049
P8 Cb GC
GCCTCCCCTG
(
7
)
3.3
0.0033
P8 Cb GC
CACCGAGCAC
1.6
0.0016
P8 Cb GC
GGAAATTTAA (
2
)
1.6
0.0016
P8 Cb GC
GGGCCTGGCC (
5
)
1.6
0.0016
Cb medulloblastoma
CCCTGCACAG
(
2
)
6.9
0.0069
Cb medulloblastoma
TCTCTAAAAA (
7
)
6.9
0.0069
Cb medulloblastoma
CCCTGCCCTG (
8
)
4.6
0.0046
Cb medulloblastoma
GCCTGCCCTG
(
2
)
4.6
0.0046
P8 GC+1d culture
GCCTGCCCTG
(
2
)
17.1
0.0171
P8 GC+1d culture
CCCTGCACAG
(
2
)
9.1
0.0091
P8 GC+1d culture
CCCTGCCCTG (
8
)
5.7
0.0057
P8 GC+1d culture
TCTCTAAAAA (
7
)
2.3
0.0023
P8 GC+1d culture
GCCTCCCCTG
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CCCTGCACAG
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
GCCTGCCCTG
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
TCTCTAAAAA (
7
)
4.7
0.0047
P8 GC+SHH+1d culture
CCCTGCCCTG (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
GAAGCACACA
1.2
0.0012
P8 GC+SHH+1d culture
GGAAATTTAA (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGCCTGGCC (
5
)
1.2
0.0012
3T3 fibroblasts
CCCTGCCCTG (
8
)
17.5
0.0175
3T3 fibroblasts
CCCTGCACAG
(
2
)
14
0.014
3T3 fibroblasts
GCCTCCCCTG
(
7
)
14
0.014
3T3 fibroblasts
GCCTGCCCTG
(
2
)
10.5
0.0105
E15 cortex
CCCTGCCCTG (
8
)
4.9
0.0049
E15 cortex
GCCTGCCTGC (
9
)
4.9
0.0049
E15 cortex
GGAAATTTAA (
2
)
4.9
0.0049
P1 cortex
GCCTCCCCTG
(
7
)
4.5
0.0045
P1 cortex
GCCTGCCCTG
(
2
)
4.5
0.0045
P1 cortex
GCCTGCCTGC (
9
)
4.5
0.0045
P1 cortex
TCTCTAAAAA (
7
)
4.5
0.0045
Hypothalamus
GCCTGCCCTG
(
2
)
10.9
0.0109
Hypothalamus
AAGAGGCCAC
(
4
)
3.6
0.0036
Hypothalamus
CCCTGCACAG
(
2
)
1.8
0.0018
Hypothalamus
CCCTGCCCTG (
8
)
1.8
0.0018
Hypothalamus
GCTACACAGT (
3
)
1.8
0.0018
Hypothalamus
TCTCTAAAAA (
7
)
1.8
0.0018
E12.5 retina
CCCTGCACAG
(
2
)
3.8
0.0038
E12.5 retina
CCCTGCCCTG (
8
)
3.8
0.0038
E12.5 retina
GCCTGCCCTG
(
2
)
1.9
0.0019
E14.5 retina
GCCTGCCCTG
(
2
)
14.6
0.0146
E14.5 retina
CCCTGCACAG
(
2
)
3.6
0.0036
E14.5 retina
CCCTGCCCTG (
8
)
3.6
0.0036
E14.5 retina
GAGAATGAGA (
4
)
3.6
0.0036
E14.5 retina
TCTCTAAAAA (
7
)
3.6
0.0036
E14.5 retina
AAGAGGCCAC
(
4
)
1.8
0.0018
E14.5 retina
GGAAATTTAA (
2
)
1.8
0.0018
E16.5 retina
CCCTGCACAG
(
2
)
9.1
0.0091
E16.5 retina
GCCTGCCCTG
(
2
)
9.1
0.0091
E16.5 retina
GCCTGCCTGC (
9
)
5.4
0.0054
E16.5 retina
AAGAGGCCAC
(
4
)
3.6
0.0036
E16.5 retina
CACCGAGCAC
1.8
0.0018
E16.5 retina
GAAGCACACA
1.8
0.0018
E16.5 retina
GCCTCCCCTG
(
7
)
1.8
0.0018
E18.5 retina
GCCTGCCCTG
(
2
)
10.9
0.0109
E18.5 retina
CCCTGCACAG
(
2
)
3.6
0.0036
E18.5 retina
CCCTGCCCTG (
8
)
1.8
0.0018
E18.5 retina
GAAGCACACA
1.8
0.0018
E18.5 retina
TCTCTAAAAA (
7
)
1.8
0.0018
P0.5 retina
GCCTGCCCTG
(
2
)
11.8
0.0118
P0.5 retina
CCCTGCCCTG (
8
)
5.9
0.0059
P0.5 retina
CCCTGCACAG
(
2
)
3.9
0.0039
P0.5 retina
GCCTCCCCTG
(
7
)
3.9
0.0039
P2.5 retina
GCCTGCCCTG
(
2
)
5.3
0.0053
P2.5 retina
CCCTGCCCTG (
8
)
3.5
0.0035
P2.5 retina
AAGAGGCCAC
(
4
)
1.8
0.0018
P2.5 retina
CCCTGCACAG
(
2
)
1.8
0.0018
P2.5 retina
GCCTGCCTGC (
9
)
1.8
0.0018
P2.5 retina
GGGCCTGGCC (
5
)
1.8
0.0018
P2.5 retina
TCTCTAAAAA (
7
)
1.8
0.0018
P4.5 retina
CCCTGCACAG
(
2
)
5.9
0.0059
P4.5 retina
CCCTGCCCTG (
8
)
4
0.004
P4.5 retina
GCCTGCCCTG
(
2
)
4
0.004
P4.5 retina
TCTCTAAAAA (
7
)
4
0.004
P4.5 retina
GAGAATGAAA (
7
)
2
0.002
P6.5 retina
GCCTGCCCTG
(
2
)
25
0.025
P6.5 retina
CCCTGCCCTG (
8
)
15
0.015
P6.5 retina
CCCTGCACAG
(
2
)
3.3
0.0033
P6.5 retina
TCTCTAAAAA (
7
)
3.3
0.0033
P6.5 retina
GAAGCACACA
1.7
0.0017
P6.5 retina
GCTACACAGT (
3
)
1.7
0.0017
P10.5 crx- retina
GCCTGCCCTG
(
2
)
48.3
0.0483
P10.5 crx- retina
CCCTGCCCTG (
8
)
9.3
0.0093
P10.5 crx- retina
CCCTGCACAG
(
2
)
7.4
0.0074
P10.5 crx- retina
GCCTCCCCTG
(
7
)
5.6
0.0056
P10.5 crx- retina
AAGAGGCCAC
(
4
)
3.7
0.0037
P10.5 crx- retina
CACCGAGCAC
1.9
0.0019
P10.5 crx- retina
GAGAATGAAA (
7
)
1.9
0.0019
P10.5 crx- retina
GAGAATGAGA (
4
)
1.9
0.0019
P10.5 crx- retina
GGAAATTTAA (
2
)
1.9
0.0019
P10.5 crx- retina
TCTCTAAAAA (
7
)
1.9
0.0019
P10.5 crx+ retina
GCCTGCCCTG
(
2
)
78.8
0.0788
P10.5 crx+ retina
CCCTGCCCTG (
8
)
13.5
0.0135
P10.5 crx+ retina
CCCTGCACAG
(
2
)
5.8
0.0058
P10.5 crx+ retina
GCCTCCCCTG
(
7
)
5.8
0.0058
P10.5 crx+ retina
AAGAGGCCAC
(
4
)
3.8
0.0038
P10.5 crx+ retina
CACCGAGCAC
1.9
0.0019
P10.5 crx+ retina
TCTCTAAAAA (
7
)
1.9
0.0019
Adult retinal
GCCTGCCCTG
(
2
)
42.6
0.0426
Adult retinal
CCCTGCACAG
(
2
)
11.1
0.0111
Adult retinal
CCCTGCCCTG (
8
)
9.3
0.0093
Adult retinal
GCCTCCCCTG
(
7
)
1.9
0.0019
Adult retinal
GCCTGCCTGC (
9
)
1.9
0.0019
ONL
GCCTGCCCTG
(
2
)
19.2
0.0192
ONL
CCCTGCCCTG (
8
)
5.7
0.0057
ONL
CCCTGCACAG
(
2
)
3.8
0.0038
