Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.294821	0610042I15Rik	RIKEN cDNA 0610042I15 gene	11		56418
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	YKT6[SNARE protein Ykt6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTAAGTACG (3) 31 0.031 P8 Cb GC GCCTGCTGTG (6) 6.5 0.0065 P8 Cb GC GTCTGCTGGT (3) 1.6 0.0016 P8 Cb GC TAATTTTCCC (2) 1.6 0.0016 Cb medulloblastoma TCTAAGTACG (3) 46.2 0.0462 Cb medulloblastoma GCCTGCTGTG (6) 2.3 0.0023 Cb medulloblastoma TAATTTTCCC (2) 2.3 0.0023 P8 GC+1d culture TAATTTTCCC (2) 6.8 0.0068 P8 GC+1d culture GCCTGCTGTG (6) 4.6 0.0046 P8 GC+1d culture CTACTGTGGC (2) 1.1 0.0011 P8 GC+SHH+1d culture TCTAAGTACG (3) 7 0.007 P8 GC+SHH+1d culture GCCTGCTGTG (6) 3.5 0.0035 P8 GC+SHH+1d culture CTACTGTGGC (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCTGCTGGT (3) 1.2 0.0012 P8 GC+SHH+1d culture TAATTTTCCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGACGTAGCC 1.2 0.0012 3T3 fibroblasts GCCTGCTGTG (6) 14 0.014 3T3 fibroblasts CTGAGCCTGA (7) 3.5 0.0035 P1 cortex TAATTTTCCC (2) 9.1 0.0091 Hypothalamus TAATTTTCCC (2) 3.6 0.0036 Hypothalamus CTGAGCCTGA (7) 1.8 0.0018 Hypothalamus TGACGTAGCC 1.8 0.0018 E14.5 retina GTCTGCTGGT (3) 1.8 0.0018 E14.5 retina TGACGTAGCC 1.8 0.0018 E16.5 retina TAATTTTCCC (2) 1.8 0.0018 E16.5 retina TCTAAGTACG (3) 1.8 0.0018 E18.5 retina GCCTGCTGTG (6) 3.6 0.0036 E18.5 retina TAATTTTCCC (2) 3.6 0.0036 E18.5 retina TCTAAGTACG (3) 3.6 0.0036 E18.5 retina CTACTGTGGC (2) 1.8 0.0018 P0.5 retina TAATTTTCCC (2) 3.9 0.0039 P0.5 retina CTGAGCCTGA (7) 2 0.002 P0.5 retina GCCTGCTGTG (6) 2 0.002 P2.5 retina GCCTGCTGTG (6) 3.5 0.0035 P2.5 retina TAATTTTCCC (2) 1.8 0.0018 P2.5 retina TCTAAGTACG (3) 1.8 0.0018 P2.5 retina TGACGTAGCC 1.8 0.0018 P4.5 retina TAATTTTCCC (2) 7.9 0.0079 P4.5 retina GCCTGCTGTG (6) 4 0.004 P4.5 retina CTACTGTGGC (2) 2 0.002 P6.5 retina GCCTGCTGTG (6) 3.3 0.0033 P6.5 retina TCTAAGTACG (3) 1.7 0.0017 P10.5 crx- retina GCCTGCTGTG (6) 3.7 0.0037 P10.5 crx+ retina TCTAAGTACG (3) 11.5 0.0115 P10.5 crx+ retina GTCTGCTGGT (3) 3.8 0.0038 P10.5 crx+ retina TAATTTTCCC (2) 1.9 0.0019 Adult retinal GTCTGCTGGT (3) 5.6 0.0056 Adult retinal GCCTGCTGTG (6) 1.9 0.0019 Adult retinal TCTAAGTACG (3) 1.9 0.0019 ONL TAATTTTCCC (2) 3.8 0.0038 ONL GCCTGCTGTG (6) 1.9 0.0019 ONL GTCTGCTGGT (3) 1.9 0.0019