Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29513	Ndufa7	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7 (B14.5a)	17		66416
Gene Ontology	membrane fraction | mitochondrion | mitochondrion | NADH dehydrogenase (ubiquinone) activity | NADH dehydrogenase activity | oxidoreductase activity | respiratory chain complex I (sensu Eukarya)
Human Homolog	NDUFA7[NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTGCTTTTC (2) 27.7 0.0277 P8 Cb GC ACTGCTTTTT (3) 19.6 0.0196 P8 Cb GC ACTGTCTTTT (2) 6.5 0.0065 P8 Cb GC GAAGAGGTGG (9) 3.3 0.0033 P8 Cb GC ATGGGTTCCA (3) 1.6 0.0016 P8 Cb GC TCCTCAGAAA (2) 1.6 0.0016 Cb medulloblastoma ACTGCTTTTC (2) 25.4 0.0254 Cb medulloblastoma ACTGCTTTTT (3) 6.9 0.0069 Cb medulloblastoma ATGGGTTCCA (3) 2.3 0.0023 Cb medulloblastoma GAAGAGGTGG (9) 2.3 0.0023 Cb medulloblastoma TAGGCCAAGT (5) 2.3 0.0023 Cb medulloblastoma TCCTCAGAAA (2) 2.3 0.0023 P8 GC+1d culture ACTGCTTTTT (3) 26.3 0.0263 P8 GC+1d culture ACTGCTTTTC (2) 18.3 0.0183 P8 GC+1d culture ATGGGTTCCA (3) 3.4 0.0034 P8 GC+1d culture ACTGTCTTTT (2) 2.3 0.0023 P8 GC+1d culture GAAGAGGTGG (9) 1.1 0.0011 P8 GC+1d culture TAGGCCAAGT (5) 1.1 0.0011 P8 GC+SHH+1d culture ACTGCTTTTT (3) 17.6 0.0176 P8 GC+SHH+1d culture ACTGCTTTTC (2) 15.2 0.0152 P8 GC+SHH+1d culture ATGGGTTCCA (3) 4.7 0.0047 P8 GC+SHH+1d culture GAAGAGGTGG (9) 3.5 0.0035 P8 GC+SHH+1d culture ACTGCTTTCC (3) 1.2 0.0012 P8 GC+SHH+1d culture ACTGTCTTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TAGGCCAAGT (5) 1.2 0.0012 P8 GC+SHH+1d culture TCCTCAGAAA (2) 1.2 0.0012 3T3 fibroblasts ACTGCTTTTT (3) 17.5 0.0175 3T3 fibroblasts ACTGCTTTTC (2) 3.5 0.0035 3T3 fibroblasts ATGGGTTCCA (3) 3.5 0.0035 E15 cortex ACTGCTTTTT (3) 19.8 0.0198 E15 cortex ACTGCTTTTC (2) 9.9 0.0099 E15 cortex ACTGTTTTTC 4.9 0.0049 P1 cortex ACTGCTTTTT (3) 9.1 0.0091 P1 cortex ACTGCTTTTG (5) 4.5 0.0045 P1 cortex ACTGTCTTTT (2) 4.5 0.0045 Hypothalamus GAAGAGGTGG (9) 16.3 0.0163 Hypothalamus ACTGCTTTTC (2) 9.1 0.0091 Hypothalamus ACTGCTTTTT (3) 5.4 0.0054 Hypothalamus AAGAGGTGGG 1.8 0.0018 E12.5 retina ACTGCTTTTC (2) 24.4 0.0244 E12.5 retina ACTGCTTTTT (3) 11.3 0.0113 E12.5 retina ATGGGTTCCA (3) 7.5 0.0075 E12.5 retina AAGAGGTGGG 3.8 0.0038 E12.5 retina ACTGTCTTTT (2) 3.8 0.0038 E12.5 retina GAAGAGGTGG (9) 3.8 0.0038 E12.5 retina ACTGCTTTCC (3) 1.9 0.0019 E14.5 retina ACTGCTTTTC (2) 10.9 0.0109 E14.5 retina GAAGAGGTGG (9) 3.6 0.0036 E14.5 retina AAGAGGTGGG 1.8 0.0018 E14.5 retina ACTGCTTTTT (3) 1.8 0.0018 E14.5 retina ATGGGTTCCA (3) 1.8 0.0018 E16.5 retina ACTGCTTTTC (2) 23.5 0.0235 E16.5 retina ACTGCTTTTT (3) 16.3 0.0163 E16.5 retina GAAGAGGTGG (9) 1.8 0.0018 E16.5 retina TAGGCCAAGT (5) 1.8 0.0018 E18.5 retina ACTGCTTTTC (2) 21.8 0.0218 E18.5 retina ACTGCTTTTT (3) 12.7 0.0127 E18.5 retina ACTGTCTTTT (2) 5.5 0.0055 E18.5 retina ATGGGTTCCA (3) 5.5 0.0055 E18.5 retina AAGAGGTGGG 1.8 0.0018 P0.5 retina ACTGCTTTTT (3) 35.3 0.0353 P0.5 retina ACTGCTTTTC (2) 7.9 0.0079 P0.5 retina ACTGTCTTTT (2) 3.9 0.0039 P0.5 retina GAAGAGGTGG (9) 3.9 0.0039 P0.5 retina ACTGCTTTCC (3) 2 0.002 P0.5 retina ACTGTTTTTC 2 0.002 P0.5 retina TAGGCCAAGT (5) 2 0.002 P2.5 retina ACTGCTTTTT (3) 15.8 0.0158 P2.5 retina ACTGCTTTTC (2) 12.3 0.0123 P2.5 retina ACTGCTTTCC (3) 5.3 0.0053 P2.5 retina ATGGGTTCCA (3) 5.3 0.0053 P2.5 retina ACTGTCTTTT (2) 1.8 0.0018 P4.5 retina ACTGCTTTTC (2) 23.8 0.0238 P4.5 retina ACTGCTTTTT (3) 15.9 0.0159 P4.5 retina ACTGCTTTCC (3) 4 0.004 P4.5 retina ACTGTCTTTT (2) 4 0.004 P4.5 retina ATGGGTTCCA (3) 4 0.004 P6.5 retina ACTGCTTTTC (2) 15 0.015 P6.5 retina ACTGCTTTTT (3) 10 0.01 P6.5 retina ACTGTCTTTT (2) 3.3 0.0033 P6.5 retina ATGGGTTCCA (3) 3.3 0.0033 P6.5 retina TAGGCCAAGT (5) 1.7 0.0017 P6.5 retina TCCTCAGAAA (2) 1.7 0.0017 P10.5 crx- retina ACTGCTTTTC (2) 33.4 0.0334 P10.5 crx- retina ACTGCTTTTT (3) 16.7 0.0167 P10.5 crx- retina ATGGGTTCCA (3) 5.6 0.0056 P10.5 crx- retina ACTGTCTTTT (2) 3.7 0.0037 P10.5 crx- retina GAAGAGGTGG (9) 1.9 0.0019 P10.5 crx+ retina ACTGCTTTTC (2) 25 0.025 P10.5 crx+ retina ACTGCTTTTT (3) 9.6 0.0096 P10.5 crx+ retina ATGGGTTCCA (3) 9.6 0.0096 P10.5 crx+ retina ACTGCTTTTG (5) 3.8 0.0038 P10.5 crx+ retina ACTGTTTTTC 1.9 0.0019 Adult retinal ACTGCTTTTC (2) 11.1 0.0111 Adult retinal ACTGCTTTTT (3) 9.3 0.0093 Adult retinal ATGGGTTCCA (3) 3.7 0.0037 Adult retinal ACTGCTTTCC (3) 1.9 0.0019 ONL ACTGCTTTTC (2) 9.6 0.0096 ONL ACTGCTTTTT (3) 5.7 0.0057 ONL ACTGCTTTCC (3) 3.8 0.0038