Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.295252	Ppid	peptidylprolyl isomerase D (cyclophilin D)	3		67738
Gene Ontology	FK506 binding | isomerase activity | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	PPID[peptidylprolyl isomerase D (cyclophilin D)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGTATTTGT (2) 9.8 0.0098 P8 Cb GC CTCCCTGTTG (7) 4.9 0.0049 P8 Cb GC CCAGGCAAGC (14) 1.6 0.0016 Cb medulloblastoma GCTGTGTTTC (3) 9.2 0.0092 Cb medulloblastoma AAGTATTTGT (2) 6.9 0.0069 Cb medulloblastoma CTCCCTGTTG (7) 4.6 0.0046 Cb medulloblastoma CTCCCTGTGT (5) 2.3 0.0023 P8 GC+1d culture CTCCCTGTGT (5) 4.6 0.0046 P8 GC+1d culture CTCCCTGTTG (7) 4.6 0.0046 P8 GC+1d culture AAGTATTTGT (2) 3.4 0.0034 P8 GC+1d culture GCTGTGTTTC (3) 3.4 0.0034 P8 GC+SHH+1d culture AAGTATTTGT (2) 10.5 0.0105 P8 GC+SHH+1d culture CTCCCTGTGT (5) 5.9 0.0059 P8 GC+SHH+1d culture CTCCCTGTTG (7) 5.9 0.0059 P8 GC+SHH+1d culture GCTGTGTTTC (3) 3.5 0.0035 3T3 fibroblasts CTCCCTGTTG (7) 10.5 0.0105 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CCAGGCAAGC (14) 3.5 0.0035 E15 cortex AAGTATTTGT (2) 4.9 0.0049 E15 cortex CTCCCTGTGT (5) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GCTGTGTTTC (3) 9.1 0.0091 P1 cortex AAGTATTTGT (2) 4.5 0.0045 P1 cortex CTCCCTGTGT (5) 4.5 0.0045 Hypothalamus GCTGTGTTTC (3) 7.2 0.0072 Hypothalamus AAGTATTTGT (2) 3.6 0.0036 Hypothalamus CTCCCTGTGT (5) 1.8 0.0018 E12.5 retina GCTGTGTTTC (3) 15 0.015 E12.5 retina CTCCCTGTTG (7) 13.1 0.0131 E12.5 retina AAGTATTTGT (2) 1.9 0.0019 E12.5 retina CCAGGCAAGC (14) 1.9 0.0019 E12.5 retina GAGGGAAGAA (8) 1.9 0.0019 E14.5 retina GCTGTGTTTC (3) 16.4 0.0164 E14.5 retina AAGTATTTGT (2) 5.5 0.0055 E14.5 retina CTCCCTGTTG (7) 3.6 0.0036 E16.5 retina AAGTATTTGT (2) 9.1 0.0091 E16.5 retina GCTGTGTTTC (3) 5.4 0.0054 E16.5 retina CTCCCTGTTG (7) 3.6 0.0036 E18.5 retina GCTGTGTTTC (3) 16.4 0.0164 E18.5 retina AAGTATTTGT (2) 5.5 0.0055 E18.5 retina CTCCCTGTTG (7) 1.8 0.0018 E18.5 retina GAGGGAAGAA (8) 1.8 0.0018 P0.5 retina GCTGTGTTTC (3) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AAGTATTTGT (2) 2 0.002 P0.5 retina CTCCCTGTGT (5) 2 0.002 P0.5 retina CTCCCTGTTG (7) 2 0.002 P2.5 retina GCTGTGTTTC (3) 10.6 0.0106 P2.5 retina AAGTATTTGT (2) 3.5 0.0035 P2.5 retina CTCCCTGTTG (7) 3.5 0.0035 P2.5 retina CCAGGCAAGC (14) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AAGTATTTGT (2) 13.9 0.0139 P4.5 retina GCTGTGTTTC (3) 4 0.004 P4.5 retina CTCCCTGTGT (5) 2 0.002 P4.5 retina CTCCCTGTTG (7) 2 0.002 P4.5 retina GAGGGAAGAA (8) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina CTCCCTGTTG (7) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AAGTATTTGT (2) 1.7 0.0017 P6.5 retina CTCCCTGTGT (5) 1.7 0.0017 P10.5 crx- retina GCTGTGTTTC (3) 13 0.013 P10.5 crx- retina AAGTATTTGT (2) 9.3 0.0093 P10.5 crx- retina CTCCCTGTTG (7) 1.9 0.0019 P10.5 crx+ retina GCTGTGTTTC (3) 11.5 0.0115 P10.5 crx+ retina AAGTATTTGT (2) 5.8 0.0058 P10.5 crx+ retina CTCCCTGTGT (5) 1.9 0.0019 P10.5 crx+ retina CTCCCTGTTG (7) 1.9 0.0019 Adult retinal CTCCCTGTGT (5) 3.7 0.0037 Adult retinal AAGTATTTGT (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GCTGTGTTTC (3) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAGTATTTGT (2) 3.8 0.0038