Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29558	D430040D24Rik	RIKEN cDNA D430040D24 gene	1		319678
Mm.29558	Sema4c	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C	1		20353
Gene Ontology	development | extracellular space | integral to membrane | membrane | neurogenesis | receptor activity
Human Homolog	SEMA4C[sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTATGGATAC (2) 3.3 0.0033 P8 Cb GC AAAGGAAACT (3) 1.6 0.0016 P8 Cb GC AAGGGGAAGG (6) 1.6 0.0016 P8 Cb GC CTTTTTAATA (3) 1.6 0.0016 Cb medulloblastoma CCCACCTCCT (6) 2.3 0.0023 Cb medulloblastoma CTTTTTAATA (3) 2.3 0.0023 P8 GC+1d culture CTATGGATAC (2) 4.6 0.0046 P8 GC+1d culture CCCACCTCCT (6) 2.3 0.0023 P8 GC+1d culture AAGGGGAAGG (6) 1.1 0.0011 P8 GC+SHH+1d culture AAGGGGAAGG (6) 1.2 0.0012 P8 GC+SHH+1d culture CTATGGATAC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTTAATA (3) 1.2 0.0012 3T3 fibroblasts CCTCCCATCT (3) 17.5 0.0175 Hypothalamus AAGGGGAAGG (6) 1.8 0.0018 E12.5 retina CTATGGATAC (2) 5.6 0.0056 E14.5 retina CTATGGATAC (2) 3.6 0.0036 E14.5 retina AAAGGAAACT (3) 1.8 0.0018 E16.5 retina CCCACCTCCT (6) 7.2 0.0072 E16.5 retina GCCCACACTG (8) 1.8 0.0018 E18.5 retina CTATGGATAC (2) 5.5 0.0055 E18.5 retina CTTTTTAATA (3) 1.8 0.0018 P0.5 retina CCCACCTCCT (6) 2 0.002 P0.5 retina GCCCACACTG (8) 2 0.002 P2.5 retina CTATGGATAC (2) 5.3 0.0053 P4.5 retina CTATGGATAC (2) 2 0.002 P4.5 retina CTTTTTAATA (3) 2 0.002 P6.5 retina CCCACCTCCT (6) 1.7 0.0017 P6.5 retina CTATGGATAC (2) 1.7 0.0017 P6.5 retina CTTTTTAATA (3) 1.7 0.0017 P10.5 crx- retina CTATGGATAC (2) 1.9 0.0019 P10.5 crx+ retina GCCCACACTG (8) 1.9 0.0019 ONL AAAGGAAACT (3) 1.9 0.0019