Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29561	Ctsf	cathepsin F	19		56464
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | peptidase activity | proteolysis and peptidolysis
Human Homolog	CTSF[cathepsin F]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGCCAGCG (2) 1.6 0.0016 Cb medulloblastoma GAAGCCAGCG (2) 11.6 0.0116 Cb medulloblastoma TTTGGTGTGT (4) 4.6 0.0046 Cb medulloblastoma CCTGAGAACC (6) 2.3 0.0023 P8 GC+1d culture GAAGCCAGCG (2) 9.1 0.0091 P8 GC+1d culture GAAGCAGGGC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAGCCAGCG (2) 5.9 0.0059 P8 GC+SHH+1d culture CCTGAGAACC (6) 1.2 0.0012 E15 cortex CCCAGGCCCT 4.9 0.0049 E15 cortex GAAGCCAGCG (2) 4.9 0.0049 P1 cortex GAAGCAGGGC (2) 9.1 0.0091 P1 cortex AAAGCCTCCT 4.5 0.0045 P1 cortex CCCTGGTTCT (2) 4.5 0.0045 P1 cortex GAAGCCAGCG (2) 4.5 0.0045 Hypothalamus AAAGCCTCCT 3.6 0.0036 Hypothalamus GAAGCCAGCG (2) 3.6 0.0036 Hypothalamus TTTGGTGTGT (4) 1.8 0.0018 E12.5 retina CCTGAGAACC (6) 1.9 0.0019 E14.5 retina GAAGCAGGGC (2) 1.8 0.0018 E14.5 retina TTTGGTGTGT (4) 1.8 0.0018 E16.5 retina GAAGCCAGCG (2) 10.9 0.0109 E16.5 retina AGGATGGTAG (3) 1.8 0.0018 E16.5 retina CCCTGGTTCT (2) 1.8 0.0018 E16.5 retina GAAGCAGGGC (2) 1.8 0.0018 E18.5 retina CCTGAGAACC (6) 1.8 0.0018 P0.5 retina GAAGCCAGCG (2) 15.7 0.0157 P0.5 retina AAAGCCTCCT 2 0.002 P0.5 retina TTTGGTGTGT (4) 2 0.002 P2.5 retina GAAGCCAGCG (2) 12.3 0.0123 P2.5 retina GAAGCAGGGC (2) 3.5 0.0035 P4.5 retina GAAGCCAGCG (2) 21.8 0.0218 P4.5 retina CCTGAGAACC (6) 2 0.002 P6.5 retina GAAGCCAGCG (2) 15 0.015 P6.5 retina CCCAGGCCCT 3.3 0.0033 P6.5 retina CCCTGGTTCT (2) 1.7 0.0017 P10.5 crx- retina GAAGCCAGCG (2) 31.6 0.0316 P10.5 crx- retina AAAGCCTCCT 1.9 0.0019 P10.5 crx- retina CCCAGGCCCT 1.9 0.0019 P10.5 crx+ retina GAAGCCAGCG (2) 34.6 0.0346 P10.5 crx+ retina CCTGAGAACC (6) 3.8 0.0038 P10.5 crx+ retina AGGATGGTAG (3) 1.9 0.0019 P10.5 crx+ retina TTTGGTGTGT (4) 1.9 0.0019 Adult retinal GAAGCCAGCG (2) 22.2 0.0222 Adult retinal AGGATGGTAG (3) 1.9 0.0019 Adult retinal CCCAGGCCCT 1.9 0.0019 Adult retinal TTTGGTGTGT (4) 1.9 0.0019 ONL GAAGCCAGCG (2) 9.6 0.0096