Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.295660
AI428795
expressed sequence AI428795
5
209683
Human Homolog
KIAA1043[KIAA1043 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGCCTGTCAG
(
4
)
21.2
0.0212
P8 Cb GC
TGAAATAAAA (
9
)
1.6
0.0016
Cb medulloblastoma
TGAAATAAAA (
9
)
11.6
0.0116
Cb medulloblastoma
AGCCTGTCAG
(
4
)
2.3
0.0023
P8 GC+1d culture
AGCCTGTCAG
(
4
)
3.4
0.0034
P8 GC+1d culture
TGAAATAAAA (
9
)
3.4
0.0034
P8 GC+SHH+1d culture
AGCCTGTCAG
(
4
)
2.3
0.0023
E15 cortex
AGCCTGTCAG
(
4
)
9.9
0.0099
E15 cortex
TGAAATAAAA (
9
)
4.9
0.0049
P1 cortex
TGAAATAAAA (
9
)
13.6
0.0136
P1 cortex
AGCCTGTCAG
(
4
)
9.1
0.0091
Hypothalamus
TGAAATAAAA (
9
)
12.7
0.0127
Hypothalamus
AGCCTGTCAG
(
4
)
1.8
0.0018
E12.5 retina
AGCCTGTCAG
(
4
)
5.6
0.0056
E12.5 retina
TGAAATAAAA (
9
)
5.6
0.0056
E14.5 retina
AGCCTGTCAG
(
4
)
5.5
0.0055
E14.5 retina
TGAAATAAAA (
9
)
5.5
0.0055
E16.5 retina
TGAAATAAAA (
9
)
10.9
0.0109
E16.5 retina
AGCCTGTCAG
(
4
)
3.6
0.0036
E18.5 retina
AGCCTGTCAG
(
4
)
14.6
0.0146
E18.5 retina
TGAAATAAAA (
9
)
9.1
0.0091
E18.5 retina
GACTCTTTTT
(
2
)
1.8
0.0018
P0.5 retina
AGCCTGTCAG
(
4
)
3.9
0.0039
P0.5 retina
GACGTCTCTA
3.9
0.0039
P0.5 retina
TAGCAGATGA
2
0.002
P2.5 retina
AGCCTGTCAG
(
4
)
14.1
0.0141
P2.5 retina
TGAAATAAAA (
9
)
1.8
0.0018
P4.5 retina
TGAAATAAAA (
9
)
15.9
0.0159
P4.5 retina
AGCCTGTCAG
(
4
)
9.9
0.0099
P6.5 retina
AGCCTGTCAG
(
4
)
10
0.01
P6.5 retina
TGAAATAAAA (
9
)
5
0.005
P6.5 retina
GACTCTTTTT
(
2
)
1.7
0.0017
P10.5 crx- retina
AGCCTGTCAG
(
4
)
9.3
0.0093
P10.5 crx- retina
TGAAATAAAA (
9
)
3.7
0.0037
P10.5 crx+ retina
AGCCTGTCAG
(
4
)
17.3
0.0173
P10.5 crx+ retina
TGAAATAAAA (
9
)
3.8
0.0038
Adult retinal
AGCCTGTCAG
(
4
)
5.6
0.0056
Adult retinal
TAGCAGATGA
1.9
0.0019
Adult retinal
TGAAATAAAA (
9
)
1.9
0.0019
ONL
TGAAATAAAA (
9
)
3.8
0.0038
ONL
GACGTCTCTA
1.9
0.0019
ONL
GACTCTTTTT
(
2
)
1.9
0.0019
