Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.295715
D730001C10Rik
RIKEN cDNA D730001C10 gene
12
78589
Mm.295715
1700047I17Rik
RIKEN cDNA 1700047I17 gene
12
73385
Human Homolog
C14orf24[chromosome 14 open reading frame 24]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 91 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTGTACAAC
(
3
)
4.9
0.0049
P8 Cb GC
ATCTCTGCAA
(
6
)
3.3
0.0033
P8 Cb GC
CCTTTGATCC (
22
)
3.3
0.0033
P8 Cb GC
GAGGTCAGTA
(
2
)
1.6
0.0016
P8 Cb GC
GTGACACCTG
(
6
)
1.6
0.0016
Cb medulloblastoma
AGCTGGAGGC
(
3
)
4.6
0.0046
Cb medulloblastoma
CCTGTACAAC
(
3
)
2.3
0.0023
Cb medulloblastoma
CCTTTGATCC (
22
)
2.3
0.0023
Cb medulloblastoma
GTGACACCTG
(
6
)
2.3
0.0023
P8 GC+1d culture
ATCTCTGCAA
(
6
)
3.4
0.0034
P8 GC+1d culture
GTGACACCTG
(
6
)
3.4
0.0034
P8 GC+1d culture
GAGGTCAGTA
(
2
)
2.3
0.0023
P8 GC+1d culture
CCTTTGATCC (
22
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTGTACAAC
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
ATCTCTGCAA
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
CCTTTGATCC (
22
)
1.2
0.0012
P8 GC+SHH+1d culture
GATTTTCATT (
2
)
1.2
0.0012
3T3 fibroblasts
AGCTGGAGGC
(
3
)
7
0.007
3T3 fibroblasts
ATCTCTGCAA
(
6
)
3.5
0.0035
3T3 fibroblasts
GTGACACCTG
(
6
)
3.5
0.0035
E15 cortex
GTGACACCTG
(
6
)
9.9
0.0099
E15 cortex
ATCTCTGCAA
(
6
)
4.9
0.0049
P1 cortex
CCTTTGATCC (
22
)
13.6
0.0136
P1 cortex
GTGACACCTG
(
6
)
9.1
0.0091
P1 cortex
AGCTGGAGGC
(
3
)
4.5
0.0045
P1 cortex
CAGGCCTGAG (
2
)
4.5
0.0045
P1 cortex
CTGCGGGCCG
(
4
)
4.5
0.0045
Hypothalamus
CCTGTACAAC
(
3
)
3.6
0.0036
Hypothalamus
CTTGGCTAAA
(
2
)
3.6
0.0036
Hypothalamus
CAGGCCTGAG (
2
)
1.8
0.0018
Hypothalamus
GGGAAGAAGA
(
8
)
1.8
0.0018
Hypothalamus
GTGACACCTG
(
6
)
1.8
0.0018
E12.5 retina
ATCTCTGCAA
(
6
)
9.4
0.0094
E12.5 retina
CCTTTGATCC (
22
)
5.6
0.0056
E12.5 retina
CCTGTACAAC
(
3
)
3.8
0.0038
E12.5 retina
GAGGTCAGTA
(
2
)
1.9
0.0019
E12.5 retina
TCAGAAGAAG (
8
)
1.9
0.0019
E14.5 retina
CCTGTACAAC
(
3
)
3.6
0.0036
E14.5 retina
GGGAAGAAGA
(
8
)
3.6
0.0036
E14.5 retina
ATCTCTGCAA
(
6
)
1.8
0.0018
E14.5 retina
CCTTTGATCC (
22
)
1.8
0.0018
E14.5 retina
GATTTTCATT (
2
)
1.8
0.0018
E14.5 retina
TCAGAAGAAG (
8
)
1.8
0.0018
E16.5 retina
ATCTCTGCAA
(
6
)
5.4
0.0054
E16.5 retina
CCTTTGATCC (
22
)
3.6
0.0036
E16.5 retina
GTGACACCTG
(
6
)
3.6
0.0036
E16.5 retina
CCTGTACAAC
(
3
)
1.8
0.0018
E16.5 retina
GAGGTCAGTA
(
2
)
1.8
0.0018
E16.5 retina
GATTTTCATT (
2
)
1.8
0.0018
E18.5 retina
CCTGTACAAC
(
3
)
3.6
0.0036
E18.5 retina
ATCTCTGCAA
(
6
)
1.8
0.0018
E18.5 retina
CCTTTGATCC (
22
)
1.8
0.0018
E18.5 retina
GTGACACCTG
(
6
)
1.8
0.0018
P0.5 retina
GAGGTCAGTA
(
2
)
5.9
0.0059
P0.5 retina
ATCTCTGCAA
(
6
)
3.9
0.0039
P0.5 retina
CCTTTGATCC (
22
)
2
0.002
P0.5 retina
CTGCGGGCCG
(
4
)
2
0.002
P0.5 retina
GATTTTCATT (
2
)
2
0.002
P2.5 retina
CCTTTGATCC (
22
)
7
0.007
P2.5 retina
ATCTCTGCAA
(
6
)
3.5
0.0035
P2.5 retina
CCTGTACAAC
(
3
)
3.5
0.0035
P2.5 retina
CTGCGGGCCG
(
4
)
1.8
0.0018
P4.5 retina
ATCTCTGCAA
(
6
)
5.9
0.0059
P4.5 retina
CCTTTGATCC (
22
)
5.9
0.0059
P4.5 retina
GTGACACCTG
(
6
)
4
0.004
P4.5 retina
CCTGTACAAC
(
3
)
2
0.002
P4.5 retina
GAGGTCAGTA
(
2
)
2
0.002
P6.5 retina
GTGACACCTG
(
6
)
6.7
0.0067
P6.5 retina
ATCTCTGCAA
(
6
)
3.3
0.0033
P6.5 retina
CCTTTGATCC (
22
)
3.3
0.0033
P6.5 retina
CCTGTACAAC
(
3
)
1.7
0.0017
P6.5 retina
CTGCGGGCCG
(
4
)
1.7
0.0017
P6.5 retina
CTTGGCTAAA
(
2
)
1.7
0.0017
P10.5 crx- retina
ATCTCTGCAA
(
6
)
13
0.013
P10.5 crx- retina
GTGACACCTG
(
6
)
3.7
0.0037
P10.5 crx+ retina
CCTTTGATCC (
22
)
5.8
0.0058
P10.5 crx+ retina
GTGACACCTG
(
6
)
5.8
0.0058
P10.5 crx+ retina
ATCTCTGCAA
(
6
)
3.8
0.0038
P10.5 crx+ retina
CCTGTACAAC
(
3
)
3.8
0.0038
P10.5 crx+ retina
CCTTTAACCT (
2
)
3.8
0.0038
P10.5 crx+ retina
CTTGGCTAAA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCAGAAGAAG (
8
)
1.9
0.0019
Adult retinal
GTGACACCTG
(
6
)
3.7
0.0037
Adult retinal
CAGGCCTGAG (
2
)
1.9
0.0019
Adult retinal
CCTGTACAAC
(
3
)
1.9
0.0019
Adult retinal
CCTTTAACCT (
2
)
1.9
0.0019
ONL
CCTTTGATCC (
22
)
5.7
0.0057
ONL
GTGACACCTG
(
6
)
5.7
0.0057
ONL
CCTTTAACCT (
2
)
3.8
0.0038
ONL
AGCTGGAGGC
(
3
)
1.9
0.0019
ONL
ATCTCTGCAA
(
6
)
1.9
0.0019
