Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2958	AI843786	expressed sequence AI843786	6		101171
Mm.2958	Cdkn1b	cyclin-dependent kinase inhibitor 1B (P27)	6	6 G1 (6 62.0 cM)	12576
Gene Ontology	cell cycle | cell cycle arrest | cyclin-dependent protein kinase inhibitor activity | kinase activity | negative regulation of CDK activity | negative regulation of cell proliferation | nucleus | positive regulation of cell proliferation | protein binding | protein kinase inhibitor activity
Human Homolog	CDKN1B[cyclin-dependent kinase inhibitor 1B (p27, Kip1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCACTTTGGC (2) 14.7 0.0147 P8 Cb GC TTTTGTGCAT (2) 8.2 0.0082 P8 Cb GC AAGCTTATTC (3) 3.3 0.0033 P8 Cb GC GATGAGGAAG (9) 3.3 0.0033 P8 Cb GC GGGGTGAAGA (4) 1.6 0.0016 P8 Cb GC TATGTTCTTA (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCACTTTGGC (2) 13.9 0.0139 Cb medulloblastoma AAGCTTATTC (3) 4.6 0.0046 Cb medulloblastoma GATGAGGAAG (9) 2.3 0.0023 Cb medulloblastoma TGTCAAAAAT (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTTGTGCAT (2) 17.1 0.0171 P8 GC+1d culture CCACTTTGGC (2) 14.8 0.0148 P8 GC+1d culture AAGCTTATTC (3) 3.4 0.0034 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TTTTGTGCAT (2) 14.1 0.0141 P8 GC+SHH+1d culture CCACTTTGGC (2) 8.2 0.0082 P8 GC+SHH+1d culture AAGCTTATTC (3) 5.9 0.0059 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TTTTGTGCAT (2) 7 0.007 3T3 fibroblasts CCACTTTGGC (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCACTTTGGC (2) 9.9 0.0099 E15 cortex GATGAGGAAG (9) 4.9 0.0049 E15 cortex TTTTGTGCAT (2) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus AAGCTTATTC (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCACTTTGGC (2) 7.5 0.0075 E12.5 retina AAGCTTATTC (3) 1.9 0.0019 E12.5 retina TATGTTCTTA (3) 1.9 0.0019 E12.5 retina TTTTGTGCAT (2) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTTTGTGCAT (2) 9.1 0.0091 E14.5 retina CCACTTTGGC (2) 3.6 0.0036 E14.5 retina GATGAGGAAG (9) 3.6 0.0036 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GATGAGGAAG (9) 3.6 0.0036 E16.5 retina TTTTGTGCAT (2) 3.6 0.0036 E16.5 retina CCACTTTGGC (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TTTTGTGCAT (2) 7.3 0.0073 E18.5 retina CCACTTTGGC (2) 1.8 0.0018 E18.5 retina GATGAGGAAG (9) 1.8 0.0018 E18.5 retina GGGGTGAAGA (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TTTTGTGCAT (2) 9.8 0.0098 P0.5 retina CCACTTTGGC (2) 2 0.002 P0.5 retina GATGAGGAAG (9) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TTTTGTGCAT (2) 15.8 0.0158 P2.5 retina CCACTTTGGC (2) 7 0.007 P2.5 retina TATGTTCTTA (3) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GGGGTGAAGA (4) 4 0.004 P4.5 retina AAGCTTATTC (3) 2 0.002 P4.5 retina TTTTGTGCAT (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCACTTTGGC (2) 6.7 0.0067 P6.5 retina TTTTGTGCAT (2) 5 0.005 P6.5 retina AAGCTTATTC (3) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TGTCAAAAAT (3) 3.7 0.0037 P10.5 crx- retina TTTTGTGCAT (2) 3.7 0.0037 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCACTTTGGC (2) 5.8 0.0058 P10.5 crx+ retina AAGCTTATTC (3) 1.9 0.0019 P10.5 crx+ retina GATGAGGAAG (9) 1.9 0.0019 P10.5 crx+ retina TTTTGTGCAT (2) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCACTTTGGC (2) 3.7 0.0037 Adult retinal TTTTGTGCAT (2) 3.7 0.0037 Adult retinal GATGAGGAAG (9) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCACTTTGGC (2) 1.9 0.0019 ONL TTTTGTGCAT (2) 1.9 0.0019