Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29590	Idh3b	isocitrate dehydrogenase 3 (NAD+) beta	2		170718
Gene Ontology	extracellular space | isocitrate dehydrogenase (NAD+) activity | metabolism | mitochondrion | mitochondrion | oxidoreductase activity | tricarboxylic acid cycle
Human Homolog	IDH3B[isocitrate dehydrogenase 3 (NAD+) beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGATAAAA (5) 11.4 0.0114 P8 Cb GC AAAAAAATAG (4) 4.9 0.0049 P8 Cb GC ATAAAACCCC (4) 3.3 0.0033 P8 Cb GC AAAAAAAATA (12) 1.6 0.0016 Cb medulloblastoma AAAAAAATAG (4) 20.8 0.0208 Cb medulloblastoma ATAAAACCCC (4) 6.9 0.0069 Cb medulloblastoma AAAAAAAATA (12) 4.6 0.0046 Cb medulloblastoma TCCAATGAAC 4.6 0.0046 Cb medulloblastoma AATGATAAAA (5) 2.3 0.0023 P8 GC+1d culture AAAAAAATAG (4) 9.1 0.0091 P8 GC+1d culture AATGATAAAA (5) 4.6 0.0046 P8 GC+1d culture AAAAAAAATA (12) 1.1 0.0011 P8 GC+1d culture AAACCTGGGG (8) 1.1 0.0011 P8 GC+1d culture ATTTGGCAAA 1.1 0.0011 P8 GC+SHH+1d culture AATGATAAAA (5) 11.7 0.0117 P8 GC+SHH+1d culture AAAAAAATAG (4) 5.9 0.0059 P8 GC+SHH+1d culture ATAAAACCCC (4) 5.9 0.0059 P8 GC+SHH+1d culture CCCAAAAAAA (19) 3.5 0.0035 P8 GC+SHH+1d culture GGCAGGAGCT (6) 2.3 0.0023 P8 GC+SHH+1d culture TGTGTCGGCC (2) 1.2 0.0012 3T3 fibroblasts ATAAAACCCC (4) 3.5 0.0035 3T3 fibroblasts ATTTGGCAAA 3.5 0.0035 3T3 fibroblasts CTTTTAATTC (9) 3.5 0.0035 E15 cortex AAAAAAATAG (4) 4.9 0.0049 E15 cortex AATGATAAAA (5) 4.9 0.0049 E15 cortex CCCAAAAAAA (19) 4.9 0.0049 E15 cortex CTTTTAATTC (9) 4.9 0.0049 P1 cortex AATGATAAAA (5) 4.5 0.0045 Hypothalamus AAAAAAATAG (4) 16.3 0.0163 Hypothalamus AATGATAAAA (5) 1.8 0.0018 Hypothalamus GGCAGGAGCT (6) 1.8 0.0018 Hypothalamus TCCAATGAAC 1.8 0.0018 Hypothalamus TGTGTCGGCC (2) 1.8 0.0018 E12.5 retina AATGATAAAA (5) 13.1 0.0131 E12.5 retina AAAAAAATAG (4) 5.6 0.0056 E12.5 retina AGAAAATAAA (5) 3.8 0.0038 E14.5 retina AATGATAAAA (5) 31 0.031 E14.5 retina GGCAGGAGCT (6) 7.3 0.0073 E14.5 retina AAAAAAATAG (4) 1.8 0.0018 E14.5 retina AGAGCGCCAA 1.8 0.0018 E16.5 retina AATGATAAAA (5) 21.7 0.0217 E16.5 retina AAAAAAATAG (4) 9.1 0.0091 E16.5 retina GGCAGGAGCT (6) 3.6 0.0036 E16.5 retina AAAAAAAATA (12) 1.8 0.0018 E16.5 retina AGAAAATAAA (5) 1.8 0.0018 E16.5 retina CCCAAAAAAA (19) 1.8 0.0018 E18.5 retina AATGATAAAA (5) 30.9 0.0309 E18.5 retina AAAAAAATAG (4) 7.3 0.0073 E18.5 retina AAAAAAAATA (12) 3.6 0.0036 E18.5 retina CCCAAAAAAA (19) 3.6 0.0036 E18.5 retina AGAAAATAAA (5) 1.8 0.0018 E18.5 retina AGAGCGCCAA 1.8 0.0018 E18.5 retina ATTTGGCAAA 1.8 0.0018 P0.5 retina AATGATAAAA (5) 7.9 0.0079 P0.5 retina AAAAAAATAG (4) 3.9 0.0039 P0.5 retina CCCAAAAAAA (19) 2 0.002 P2.5 retina AATGATAAAA (5) 15.8 0.0158 P2.5 retina AAAAAAATAG (4) 12.3 0.0123 P2.5 retina CCCAAAAAAA (19) 1.8 0.0018 P4.5 retina AATGATAAAA (5) 11.9 0.0119 P4.5 retina AAAAAAATAG (4) 7.9 0.0079 P4.5 retina AAAAAAAATA (12) 5.9 0.0059 P4.5 retina AAACCTGGGG (8) 2 0.002 P4.5 retina AGAAAATAAA (5) 2 0.002 P4.5 retina CCCAAAAAAA (19) 2 0.002 P4.5 retina CTTTTAATTC (9) 2 0.002 P6.5 retina AATGATAAAA (5) 6.7 0.0067 P6.5 retina AAAAAAATAG (4) 5 0.005 P6.5 retina CCCAAAAAAA (19) 3.3 0.0033 P6.5 retina AAACCTGGGG (8) 1.7 0.0017 P6.5 retina AGAAAATAAA (5) 1.7 0.0017 P10.5 crx- retina AAAAAAATAG (4) 5.6 0.0056 P10.5 crx- retina AATGATAAAA (5) 5.6 0.0056 P10.5 crx- retina GGCAGGAGCT (6) 3.7 0.0037 P10.5 crx- retina AGAAAATAAA (5) 1.9 0.0019 P10.5 crx- retina TGTGTCGGCC (2) 1.9 0.0019 P10.5 crx+ retina AATGATAAAA (5) 3.8 0.0038 P10.5 crx+ retina AAAAAAATAG (4) 1.9 0.0019 P10.5 crx+ retina GGCAGGAGCT (6) 1.9 0.0019 Adult retinal AAAAAAATAG (4) 1.9 0.0019 Adult retinal AATGATAAAA (5) 1.9 0.0019 Adult retinal AGAAAATAAA (5) 1.9 0.0019 Adult retinal CCCAAAAAAA (19) 1.9 0.0019 Adult retinal TCCAATGAAC 1.9 0.0019 ONL AAAAAAATAG (4) 7.7 0.0077 ONL AAAAAAAATA (12) 5.7 0.0057 ONL AATGATAAAA (5) 5.7 0.0057 ONL CTTTTAATTC (9) 3.8 0.0038 ONL AGAAAATAAA (5) 1.9 0.0019 ONL CCCAAAAAAA (19) 1.9 0.0019