Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296043	3930401E15Rik	RIKEN cDNA 3930401E15 gene	18		66676
Gene Ontology	endoplasmic reticulum | integral to membrane | intracellular protein transport | membrane | protein carrier activity
Human Homolog	TICAM2[toll-like receptor adaptor molecule 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACTGATTG 8.2 0.0082 P8 Cb GC TAAAATAAAA (14) 8.2 0.0082 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 P8 Cb GC GCTCAAAAAA (11) 1.6 0.0016 P8 Cb GC TTAAATAAAA (8) 1.6 0.0016 Cb medulloblastoma ACCAAAAAAA (6) 78.6 0.0786 Cb medulloblastoma TAAAATAAAA (14) 18.5 0.0185 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 Cb medulloblastoma GAACTGATTG 4.6 0.0046 Cb medulloblastoma GCTCAAAAAA (11) 2.3 0.0023 Cb medulloblastoma TATGTGTGGG (5) 2.3 0.0023 P8 GC+1d culture TAAAATAAAA (14) 12.6 0.0126 P8 GC+1d culture GGGAGAGGAC (2) 3.4 0.0034 P8 GC+1d culture ACTCGATACA 2.3 0.0023 P8 GC+1d culture GAACTGATTG 2.3 0.0023 P8 GC+1d culture GCTCAAAAAA (11) 2.3 0.0023 P8 GC+1d culture TTAAATAAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture TAAAATAAAA (14) 8.2 0.0082 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture GAACTGATTG 2.3 0.0023 P8 GC+SHH+1d culture GCTCAAAAAA (11) 2.3 0.0023 P8 GC+SHH+1d culture ACCAAAAAAA (6) 1.2 0.0012 P8 GC+SHH+1d culture ACTCGATACA 1.2 0.0012 P8 GC+SHH+1d culture GGGAGAGGAC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTAAATAAAA (8) 1.2 0.0012 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 3T3 fibroblasts GAACTGATTG 3.5 0.0035 3T3 fibroblasts GGGAGAGGAC (2) 3.5 0.0035 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex TAAAATAAAA (14) 13.6 0.0136 P1 cortex ACCAAAAAAA (6) 9.1 0.0091 P1 cortex TTAAATAAAA (8) 9.1 0.0091 P1 cortex ACTCGATACA 4.5 0.0045 Hypothalamus ACCAAAAAAA (6) 43.5 0.0435 Hypothalamus TAAAATAAAA (14) 12.7 0.0127 Hypothalamus GAACTGATTG 3.6 0.0036 Hypothalamus ACAAAACAAA 1.8 0.0018 Hypothalamus GCTCAAAAAA (11) 1.8 0.0018 E12.5 retina GAACTGATTG 11.3 0.0113 E12.5 retina TAAAATAAAA (14) 11.3 0.0113 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina GAACTGATTG 3.6 0.0036 E14.5 retina GCTCAAAAAA (11) 3.6 0.0036 E14.5 retina GGGAGAGGAC (2) 3.6 0.0036 E14.5 retina TAAAATAAAA (14) 3.6 0.0036 E14.5 retina ACCAAAAAAA (6) 1.8 0.0018 E16.5 retina TAAAATAAAA (14) 5.4 0.0054 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina ACCAAAAAAA (6) 1.8 0.0018 E16.5 retina GCTCAAAAAA (11) 1.8 0.0018 E18.5 retina TAAAATAAAA (14) 14.6 0.0146 E18.5 retina GAACTGATTG 5.5 0.0055 E18.5 retina ACCAAAAAAA (6) 3.6 0.0036 E18.5 retina TTAAATAAAA (8) 3.6 0.0036 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 E18.5 retina GCTCAAAAAA (11) 1.8 0.0018 P0.5 retina ACCAAAAAAA (6) 5.9 0.0059 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina GGGAGAGGAC (2) 2 0.002 P0.5 retina TAAAATAAAA (14) 2 0.002 P0.5 retina TTAAATAAAA (8) 2 0.002 P2.5 retina TAAAATAAAA (14) 8.8 0.0088 P2.5 retina GAACTGATTG 3.5 0.0035 P2.5 retina TTAAATAAAA (8) 3.5 0.0035 P2.5 retina CAAGAGCAAA (2) 1.8 0.0018 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P2.5 retina GGGAGAGGAC (2) 1.8 0.0018 P4.5 retina TAAAATAAAA (14) 27.7 0.0277 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina CAAGAGCAAA (2) 2 0.002 P4.5 retina GAACTGATTG 2 0.002 P6.5 retina TAAAATAAAA (14) 11.7 0.0117 P6.5 retina GCTCAAAAAA (11) 6.7 0.0067 P6.5 retina CCTTTAATTC (36) 5 0.005 P6.5 retina ACCAAAAAAA (6) 3.3 0.0033 P6.5 retina GAACTGATTG 3.3 0.0033 P6.5 retina GGGAGAGGAC (2) 1.7 0.0017 P6.5 retina TTAAATAAAA (8) 1.7 0.0017 P10.5 crx- retina GAACTGATTG 5.6 0.0056 P10.5 crx- retina TAAAATAAAA (14) 5.6 0.0056 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx- retina TATGTGTGGG (5) 1.9 0.0019 P10.5 crx- retina TTAAATAAAA (8) 1.9 0.0019 P10.5 crx+ retina GAACTGATTG 5.8 0.0058 P10.5 crx+ retina ACCAAAAAAA (6) 3.8 0.0038 P10.5 crx+ retina TAAAATAAAA (14) 1.9 0.0019 Adult retinal ACCAAAAAAA (6) 7.4 0.0074 Adult retinal ACTCGATACA 1.9 0.0019 Adult retinal CAAGAGCAAA (2) 1.9 0.0019 Adult retinal CCTTTAATTC (36) 1.9 0.0019 Adult retinal GAACTGATTG 1.9 0.0019 Adult retinal GCTCAAAAAA (11) 1.9 0.0019 ONL TAAAATAAAA (14) 7.7 0.0077 ONL ACAAAACAAA 3.8 0.0038 ONL CCTTTAATTC (36) 3.8 0.0038 ONL TTAAATAAAA (8) 3.8 0.0038 ONL ACCAAAAAAA (6) 1.9 0.0019 ONL GAACTGATTG 1.9 0.0019 ONL GCTCAAAAAA (11) 1.9 0.0019 ONL TATGTGTGGG (5) 1.9 0.0019