Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29608
2610024N24Rik
RIKEN cDNA 2610024N24 gene
17
71810
Gene Ontology
nucleus
|
protein transport
|
transport
Human Homolog
RANBP3[RAN binding protein 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGGAGATGG (
7
)
9.8
0.0098
P8 Cb GC
TGTTTTGGAA
(
10
)
4.9
0.0049
P8 Cb GC
AATGGGTCTC (
3
)
1.6
0.0016
Cb medulloblastoma
TGTTTTGGAA
(
10
)
16.2
0.0162
P8 GC+1d culture
TGTTTTGGAA
(
10
)
3.4
0.0034
P8 GC+1d culture
AAGGAGATGG (
7
)
2.3
0.0023
P8 GC+1d culture
GGCAGTGCCC (
2
)
2.3
0.0023
P8 GC+1d culture
GGCCTTGGGG (
6
)
1.1
0.0011
P8 GC+1d culture
TCGGCGGCCG (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTTTTGGAA
(
10
)
7
0.007
P8 GC+SHH+1d culture
GGCAGTGCCC (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGGAGATGG (
7
)
1.2
0.0012
P8 GC+SHH+1d culture
AATGGGTCTC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGCCTTGGGG (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TCGGCGGCCG (
4
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
AATGGGTCTC (
3
)
3.5
0.0035
3T3 fibroblasts
GGCCTTGGGG (
6
)
3.5
0.0035
3T3 fibroblasts
TCGGCGGCCG (
4
)
3.5
0.0035
3T3 fibroblasts
TGTTTTGGAA
(
10
)
3.5
0.0035
E15 cortex
GGCCTTGGGG (
6
)
14.8
0.0148
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
E15 cortex
TGTTTTGGAA
(
10
)
4.9
0.0049
Hypothalamus
TGTTTTGGAA
(
10
)
9.1
0.0091
Hypothalamus
GCAGGTGCCT
1.8
0.0018
Hypothalamus
TCGGCGGCCG (
4
)
1.8
0.0018
E12.5 retina
TGTTTTGGAA
(
10
)
13.1
0.0131
E12.5 retina
AATGGGTCTC (
3
)
1.9
0.0019
E14.5 retina
TGTTTTGGAA
(
10
)
21.9
0.0219
E14.5 retina
GGCCTTGGGG (
6
)
5.5
0.0055
E14.5 retina
TCGGCGGCCG (
4
)
3.6
0.0036
E16.5 retina
TGTTTTGGAA
(
10
)
29
0.029
E16.5 retina
GGCCTTGGGG (
6
)
3.6
0.0036
E16.5 retina
GCCCCAGGTC (
5
)
1.8
0.0018
E16.5 retina
TCGGCGGCCG (
4
)
1.8
0.0018
E18.5 retina
TGTTTTGGAA
(
10
)
20
0.02
E18.5 retina
AATGGGTCTC (
3
)
5.5
0.0055
E18.5 retina
AAGGAGATGG (
7
)
3.6
0.0036
E18.5 retina
GCAGGTGCCT
1.8
0.0018
E18.5 retina
GCCCCAGGTC (
5
)
1.8
0.0018
P0.5 retina
TGTTTTGGAA
(
10
)
7.9
0.0079
P0.5 retina
GGCCTTGGGG (
6
)
3.9
0.0039
P0.5 retina
GGTGACGTCT
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
CCTTAAACCC (
4
)
2
0.002
P0.5 retina
GCAGGTGCCT
2
0.002
P2.5 retina
TGTTTTGGAA
(
10
)
14.1
0.0141
P2.5 retina
GGCCTTGGGG (
6
)
7
0.007
P2.5 retina
AATGGGTCTC (
3
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
GTGTGGGTCA (
5
)
1.8
0.0018
P4.5 retina
TGTTTTGGAA
(
10
)
25.8
0.0258
P4.5 retina
GGCCTTGGGG (
6
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
TGTTTTGGAA
(
10
)
6.7
0.0067
P6.5 retina
ACTGTGAGGT
5
0.005
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
GTGTGGGTCA (
5
)
3.3
0.0033
P6.5 retina
GGCCTTGGGG (
6
)
1.7
0.0017
P6.5 retina
TCGGCGGCCG (
4
)
1.7
0.0017
P10.5 crx- retina
TGTTTTGGAA
(
10
)
20.4
0.0204
P10.5 crx- retina
CCTTAAACCC (
4
)
3.7
0.0037
P10.5 crx- retina
AAGGAGATGG (
7
)
1.9
0.0019
P10.5 crx+ retina
TGTTTTGGAA
(
10
)
7.7
0.0077
P10.5 crx+ retina
GTGTGGGTCA (
5
)
1.9
0.0019
Adult retinal
TGTTTTGGAA
(
10
)
5.6
0.0056
Adult retinal
AATGGGTCTC (
3
)
3.7
0.0037
Adult retinal
GCCCCAGGTC (
5
)
3.7
0.0037
Adult retinal
GGTGACGTCT
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
GTGTGGGTCA (
5
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
GTGTGGGTCA (
5
)
1.9
0.0019
ONL
TGTTTTGGAA
(
10
)
1.9
0.0019
