Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.296441
E430012M05Rik
RIKEN cDNA E430012M05 gene
15
321003
Gene Ontology
mitochondrion
Human Homolog
LOC63929[hypothetical protein LOC63929]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
CGCCCACCAG
1.6
0.0016
P8 Cb GC
GTAAACAAAA
(
4
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TGTGCCCCAG
(
6
)
9.2
0.0092
Cb medulloblastoma
GTAAACAAAA
(
4
)
6.9
0.0069
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GCCTCTGCCT (
5
)
3.4
0.0034
P8 GC+1d culture
GTAAACAAAA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GCCTCTGCCT (
5
)
3.5
0.0035
P8 GC+SHH+1d culture
CGCCCACCAG
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GCACTTACAA
7
0.007
3T3 fibroblasts
CGCCCACCAG
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
CCTTAAATCC
(
3
)
9.9
0.0099
E15 cortex
TGTGCCCCAG
(
6
)
9.9
0.0099
E15 cortex
CGCCCACCAG
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
TGTGCCCCAG
(
6
)
13.6
0.0136
P1 cortex
GCCTCTGCCT (
5
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
TGTGCCCCAG
(
6
)
9.1
0.0091
Hypothalamus
GCCTCTGCCT (
5
)
3.6
0.0036
Hypothalamus
CAGTGAAGAA (
4
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GCCTCTGCCT (
5
)
3.8
0.0038
E12.5 retina
CCTTAAATCC
(
3
)
1.9
0.0019
E12.5 retina
GGGAGGGGGC
(
4
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
CAGTGAAGAA (
4
)
1.8
0.0018
E14.5 retina
GCACTTACAA
1.8
0.0018
E14.5 retina
TGTGCCCCAG
(
6
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TGTGCCCCAG
(
6
)
9.1
0.0091
E16.5 retina
GCCTCTGCCT (
5
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
TGTGCCCCAG
(
6
)
10.9
0.0109
E18.5 retina
GCCTCTGCCT (
5
)
3.6
0.0036
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
TGTGCCCCAG
(
6
)
11.8
0.0118
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TGTGCCCCAG
(
6
)
10.6
0.0106
P2.5 retina
CCTTAAATCC
(
3
)
1.8
0.0018
P2.5 retina
GGGAGGGGGC
(
4
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
TGTGCCCCAG
(
6
)
15.9
0.0159
P4.5 retina
GCCTCTGCCT (
5
)
7.9
0.0079
P4.5 retina
GGGAGGGGGC
(
4
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TGTGCCCCAG
(
6
)
16.7
0.0167
P6.5 retina
GCCTCTGCCT (
5
)
3.3
0.0033
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
TGTGCCCCAG
(
6
)
20.4
0.0204
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
TGTGCCCCAG
(
6
)
13.5
0.0135
P10.5 crx+ retina
GCCTCTGCCT (
5
)
7.7
0.0077
P10.5 crx+ retina
CAGTGAAGAA (
4
)
5.8
0.0058
P10.5 crx+ retina
CGCCCACCAG
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TGTGCCCCAG
(
6
)
31.5
0.0315
Adult retinal
CCTTAAATCC
(
3
)
1.9
0.0019
Adult retinal
CGCCCACCAG
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TGTGCCCCAG
(
6
)
5.7
0.0057
ONL
CCTTAAATCC
(
3
)
3.8
0.0038
ONL
GGGAGGGGGC
(
4
)
3.8
0.0038
ONL
GTAAACAAAA
(
4
)
1.9
0.0019
