Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296457	AI317185	EST AI317185	14	14 16.6 cM	30914
Mm.296457	9530086P17Rik	RIKEN cDNA 9530086P17 gene	14		78742
Mm.296457	Peli2	pellino 2	14	14 16.5 cM	93834
Gene Ontology	protein binding | Tl signaling pathway
Human Homolog	PELI2[pellino homolog 2 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC TTTGTAAAAA (10) 6.5 0.0065 P8 Cb GC CTCAGAACAG (5) 4.9 0.0049 P8 Cb GC GAAAACGAGT (3) 1.6 0.0016 P8 Cb GC GAGACTGTTC (6) 1.6 0.0016 P8 Cb GC GGAAAATAAA (15) 1.6 0.0016 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma TTTGTAAAAA (10) 4.6 0.0046 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture CTCAGAACAG (5) 14.8 0.0148 P8 GC+1d culture TTTGTAAAAA (10) 9.1 0.0091 P8 GC+1d culture AGCTGAGGGG (3) 1.1 0.0011 P8 GC+1d culture GAAAACGAGT (3) 1.1 0.0011 P8 GC+1d culture GAGACTGTTC (6) 1.1 0.0011 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture TTTGTAAAAA (10) 9.4 0.0094 P8 GC+SHH+1d culture CTCAGAACAG (5) 5.9 0.0059 P8 GC+SHH+1d culture AGCTGAGGGG (3) 3.5 0.0035 P8 GC+SHH+1d culture GAGACTGTTC (6) 2.3 0.0023 P8 GC+SHH+1d culture GAAAACGAGT (3) 1.2 0.0012 3T3 fibroblasts CTCAGAACAG (5) 3.5 0.0035 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 E15 cortex TTTCCCCGGG (3) 4.9 0.0049 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex TTTCCCCGGG (3) 4.5 0.0045 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus CTCAGAACAG (5) 1.8 0.0018 Hypothalamus GGAAAATAAA (15) 1.8 0.0018 Hypothalamus TTTCCCCGGG (3) 1.8 0.0018 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina GAGACTGTTC (6) 3.8 0.0038 E12.5 retina CTCAGAACAG (5) 1.9 0.0019 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina TTTGTAAAAA (10) 1.8 0.0018 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina TTTGTAAAAA (10) 3.6 0.0036 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina TTTGTAAAAA (10) 9.1 0.0091 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina CTCAGAACAG (5) 2 0.002 P0.5 retina GAAAACGAGT (3) 2 0.002 P0.5 retina GAGACTGTTC (6) 2 0.002 P0.5 retina TTTGTAAAAA (10) 2 0.002 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina TTTGTAAAAA (10) 5.3 0.0053 P2.5 retina GAGACTGTTC (6) 1.8 0.0018 P2.5 retina GGAAAATAAA (15) 1.8 0.0018 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina TTTGTAAAAA (10) 7.9 0.0079 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina AGCTGAGGGG (3) 1.7 0.0017 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina TTTGTAAAAA (10) 3.7 0.0037 P10.5 crx+ retina TTTGTAAAAA (10) 7.7 0.0077 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal AGCTGAGGGG (3) 1.9 0.0019 Adult retinal TTTGTAAAAA (10) 1.9 0.0019 ONL TTAAAAAAAA (80) 7.7 0.0077