Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29646
Cndp2
CNDP dipeptidase 2 (metallopeptidase M20 family)
18
66054
Mm.29646
2900046H12Rik
RIKEN cDNA 2900046H12 gene
18
72994
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAGCACCAG
(
3
)
14.7
0.0147
P8 Cb GC
GAAGGAGTCT (
4
)
8.2
0.0082
P8 Cb GC
ATGCACAGAT (
5
)
1.6
0.0016
P8 Cb GC
GAGGAGTATG (
6
)
1.6
0.0016
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
Cb medulloblastoma
GAAGCACCAG
(
3
)
4.6
0.0046
Cb medulloblastoma
ATGCACAGAT (
5
)
2.3
0.0023
P8 GC+1d culture
GAAGCACCAG
(
3
)
13.7
0.0137
P8 GC+1d culture
GAAGGAGTCT (
4
)
5.7
0.0057
P8 GC+1d culture
ATGCACAGAT (
5
)
4.6
0.0046
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+SHH+1d culture
GAAGCACCAG
(
3
)
15.2
0.0152
P8 GC+SHH+1d culture
GAAGGAGTCT (
4
)
8.2
0.0082
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
ATGCACAGAT (
5
)
2.3
0.0023
3T3 fibroblasts
GAAGCACCAG
(
3
)
3.5
0.0035
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
E15 cortex
GAAGCACCAG
(
3
)
4.9
0.0049
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
P1 cortex
GAAGGAGTCT (
4
)
9.1
0.0091
P1 cortex
ATGCACAGAT (
5
)
4.5
0.0045
Hypothalamus
GAAGCACCAG
(
3
)
12.7
0.0127
Hypothalamus
GAAGGAGTCT (
4
)
7.2
0.0072
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
E12.5 retina
GAAGCACCAG
(
3
)
16.9
0.0169
E12.5 retina
GAAGGAGTCT (
4
)
15
0.015
E14.5 retina
GAAGCACCAG
(
3
)
10.9
0.0109
E14.5 retina
ATGCACAGAT (
5
)
1.8
0.0018
E14.5 retina
GAGGAGTATG (
6
)
1.8
0.0018
E16.5 retina
GAAGCACCAG
(
3
)
12.7
0.0127
E16.5 retina
GAAGGAGTCT (
4
)
1.8
0.0018
E16.5 retina
GAGGAGTATG (
6
)
1.8
0.0018
E16.5 retina
GAGGAGTCTG
(
5
)
1.8
0.0018
E18.5 retina
GAAGCACCAG
(
3
)
12.7
0.0127
E18.5 retina
GAAGGAGTCT (
4
)
7.3
0.0073
E18.5 retina
ATGCACAGAT (
5
)
3.6
0.0036
P0.5 retina
GAAGCACCAG
(
3
)
7.9
0.0079
P0.5 retina
GAAGGAGTCT (
4
)
3.9
0.0039
P0.5 retina
ATGCACAGAT (
5
)
2
0.002
P2.5 retina
GAAGGAGTCT (
4
)
24.6
0.0246
P2.5 retina
GAAGCACCAG
(
3
)
7
0.007
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P2.5 retina
ATGCACAGAT (
5
)
5.3
0.0053
P4.5 retina
GAAGGAGTCT (
4
)
21.8
0.0218
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
ATGCACAGAT (
5
)
4
0.004
P4.5 retina
GAAGCACCAG
(
3
)
4
0.004
P4.5 retina
GAGGAGTCTG
(
5
)
2
0.002
P6.5 retina
GAAGGAGTCT (
4
)
20
0.02
P6.5 retina
GAAGCACCAG
(
3
)
10
0.01
P6.5 retina
ATGCACAGAT (
5
)
5
0.005
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P6.5 retina
GAGGAGTATG (
6
)
1.7
0.0017
P10.5 crx- retina
GAAGGAGTCT (
4
)
7.4
0.0074
P10.5 crx- retina
ATGCACAGAT (
5
)
5.6
0.0056
P10.5 crx- retina
GAAGCACCAG
(
3
)
3.7
0.0037
P10.5 crx+ retina
GAAGGAGTCT (
4
)
15.4
0.0154
P10.5 crx+ retina
GAAGCACCAG
(
3
)
11.5
0.0115
P10.5 crx+ retina
ATGCACAGAT (
5
)
9.6
0.0096
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
Adult retinal
ATGCACAGAT (
5
)
11.1
0.0111
Adult retinal
GAAGCACCAG
(
3
)
9.3
0.0093
Adult retinal
GAAGGAGTCT (
4
)
7.4
0.0074
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
ONL
GAAGGAGTCT (
4
)
9.6
0.0096
ONL
GAAGCACCAG
(
3
)
7.7
0.0077
ONL
ATGCACAGAT (
5
)
1.9
0.0019
ONL
GAGGAGTCTG
(
5
)
1.9
0.0019
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
