Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2966	Atp5g3	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 3	2		228033
Gene Ontology	ATP synthesis coupled proton transport | glyoxylate cycle | hydrogen ion transporter activity | hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | integral to membrane | isocitrate dehydrogenase (NADP+) activity | lipid binding | membrane | metabolism | mitochondrion | oxidoreductase activity | proton transport | proton-transporting two-sector ATPase complex | tricarboxylic acid cycle
Human Homolog	ATP5G3[ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9) isoform 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAATATATG (3) 21.2 0.0212 P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC GAAATAAATG (7) 4.9 0.0049 P8 Cb GC GAAAAATATT (7) 1.6 0.0016 P8 Cb GC GCAAACAAGA 1.6 0.0016 Cb medulloblastoma GAAATATATG (3) 50.9 0.0509 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma GAAATAAATG (7) 16.2 0.0162 Cb medulloblastoma GCAAACAAGA 9.2 0.0092 Cb medulloblastoma TACAGAAATC (3) 9.2 0.0092 P8 GC+1d culture GAAATATATG (3) 37.7 0.0377 P8 GC+1d culture GAAATAAATG (7) 6.8 0.0068 P8 GC+1d culture GCAAACAAGA 5.7 0.0057 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture GAAAAATATT (7) 3.4 0.0034 P8 GC+SHH+1d culture GAAATATATG (3) 48 0.048 P8 GC+SHH+1d culture GAAATAAATG (7) 11.7 0.0117 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture GAAAAATATT (7) 2.3 0.0023 P8 GC+SHH+1d culture TAACAGAAAT (2) 1.2 0.0012 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex TAACAGAAAT (2) 4.9 0.0049 P1 cortex GAAATATATG (3) 27.3 0.0273 P1 cortex GAAAAATATT (7) 9.1 0.0091 P1 cortex GAAATAAATG (7) 4.5 0.0045 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex GGAAATATAT (2) 4.5 0.0045 P1 cortex TAACAGAAAT (2) 4.5 0.0045 P1 cortex TACAGAAATC (3) 4.5 0.0045 Hypothalamus GAAATATATG (3) 99.6 0.0996 Hypothalamus GCAAACAAGA 23.5 0.0235 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus GAAAAATATT (7) 10.9 0.0109 Hypothalamus GAAATAAATG (7) 10.9 0.0109 Hypothalamus TACAGAAATC (3) 7.2 0.0072 Hypothalamus TAACAGAAAT (2) 5.4 0.0054 Hypothalamus ACCTCTGCCG (3) 1.8 0.0018 Hypothalamus GAAATATATA (3) 1.8 0.0018 E12.5 retina GAAATATATG (3) 48.8 0.0488 E12.5 retina GAAATAAATG (7) 7.5 0.0075 E12.5 retina GCAAACAAGA 3.8 0.0038 E12.5 retina ACCTCTGCCG (3) 1.9 0.0019 E12.5 retina GAAAAATATT (7) 1.9 0.0019 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E14.5 retina GAAATATATG (3) 80.2 0.0802 E14.5 retina GAAATAAATG (7) 16.4 0.0164 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina GAAAAATATT (7) 5.5 0.0055 E14.5 retina GCAAACAAGA 5.5 0.0055 E14.5 retina TAACAGAAAT (2) 3.6 0.0036 E16.5 retina GAAATATATG (3) 88.7 0.0887 E16.5 retina GCAAACAAGA 18.1 0.0181 E16.5 retina GAAATAAATG (7) 9.1 0.0091 E16.5 retina ACCTCTGCCG (3) 5.4 0.0054 E16.5 retina GAAAAATATT (7) 1.8 0.0018 E16.5 retina GAAATATATA (3) 1.8 0.0018 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E16.5 retina GGAAATATAT (2) 1.8 0.0018 E16.5 retina TAACAGAAAT (2) 1.8 0.0018 E18.5 retina GAAATATATG (3) 80 0.08 E18.5 retina GAAATAAATG (7) 18.2 0.0182 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina GCAAACAAGA 14.6 0.0146 E18.5 retina GAAAAATATT (7) 10.9 0.0109 P0.5 retina GAAATATATG (3) 13.7 0.0137 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina GAAATAAATG (7) 3.9 0.0039 P0.5 retina GAAAAATATT (7) 2 0.002 P0.5 retina GCAAACAAGA 2 0.002 P2.5 retina GAAATATATG (3) 47.5 0.0475 P2.5 retina GAAATAAATG (7) 12.3 0.0123 P2.5 retina GCAAACAAGA 7 0.007 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina GAAAAATATT (7) 3.5 0.0035 P2.5 retina ACCTCTGCCG (3) 1.8 0.0018 P2.5 retina GGAATATATG 1.8 0.0018 P4.5 retina GAAATATATG (3) 55.5 0.0555 P4.5 retina GAAATAAATG (7) 19.8 0.0198 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina GAAAAATATT (7) 9.9 0.0099 P4.5 retina GCAAACAAGA 5.9 0.0059 P4.5 retina TACAGAAATC (3) 4 0.004 P4.5 retina GAAAATATAT (7) 2 0.002 P6.5 retina GAAATATATG (3) 73.4 0.0734 P6.5 retina GAAATAAATG (7) 16.7 0.0167 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina GCAAACAAGA 6.7 0.0067 P6.5 retina ACCTCTGCCG (3) 1.7 0.0017 P6.5 retina GAAAAATATT (7) 1.7 0.0017 P10.5 crx- retina GAAATATATG (3) 42.7 0.0427 P10.5 crx- retina GAAAAATATT (7) 7.4 0.0074 P10.5 crx- retina GAAATAAATG (7) 7.4 0.0074 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina TAACAGAAAT (2) 1.9 0.0019 P10.5 crx- retina TACAGAAATC (3) 1.9 0.0019 P10.5 crx+ retina GAAATATATG (3) 42.3 0.0423 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina GCAAACAAGA 11.5 0.0115 P10.5 crx+ retina GAAATAAATG (7) 7.7 0.0077 P10.5 crx+ retina ACCTCTGCCG (3) 3.8 0.0038 P10.5 crx+ retina GAAAAATATT (7) 3.8 0.0038 P10.5 crx+ retina TAACAGAAAT (2) 1.9 0.0019 Adult retinal GAAATAAATG (7) 9.3 0.0093 Adult retinal GAAATATATG (3) 9.3 0.0093 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal ACCTCTGCCG (3) 1.9 0.0019 Adult retinal GAAAATATAT (7) 1.9 0.0019 ONL GAAATATATG (3) 26.8 0.0268 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL GAAAAATATT (7) 11.5 0.0115 ONL GAAATAAATG (7) 11.5 0.0115 ONL ACCTCTGCCG (3) 1.9 0.0019 ONL GCAAACAAGA 1.9 0.0019