Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296610	2210016F16Rik	RIKEN cDNA 2210016F16 gene	13		70153
Human Homolog	C9orf64[chromosome 9 open reading frame 64]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GTGATGCTGG (4) 3.3 0.0033 P8 Cb GC TCTTCAGTTG (5) 3.3 0.0033 P8 Cb GC AAGGGAGTCC 1.6 0.0016 P8 Cb GC GAGATGCTGG (5) 1.6 0.0016 P8 Cb GC GGCACAGCTG (5) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GAGATGCTGG (5) 2.3 0.0023 Cb medulloblastoma GGCACAGCTG (5) 2.3 0.0023 Cb medulloblastoma TCTTCAGTTG (5) 2.3 0.0023 Cb medulloblastoma TCTTCCCTGT (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GAGATGCTGG (5) 8 0.008 P8 GC+1d culture TCTTCAGTTG (5) 8 0.008 P8 GC+1d culture TCTTCCCTGT (2) 2.3 0.0023 P8 GC+1d culture AAGGGAGTCC 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GAGATGCTGG (5) 7 0.007 P8 GC+SHH+1d culture TCTTCAGTTG (5) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GAGATGCTGG (5) 35 0.035 3T3 fibroblasts TCTTCAGTTG (5) 10.5 0.0105 3T3 fibroblasts GGCACAGCTG (5) 7 0.007 3T3 fibroblasts AAGGGAGTCC 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GAGATGCTGG (5) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GAGATGCTGG (5) 4.5 0.0045 P1 cortex GGCACAGCTG (5) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GAGATGCTGG (5) 5.4 0.0054 Hypothalamus CCAAGTGTTC (3) 1.8 0.0018 Hypothalamus GGCACAGCTG (5) 1.8 0.0018 Hypothalamus GTGATGCTGG (4) 1.8 0.0018 Hypothalamus TCTTCAGTTG (5) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina AAGGGAGTCC 1.9 0.0019 E12.5 retina CCAAGTGTTC (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GAGATGCTGG (5) 1.8 0.0018 E14.5 retina GGCACAGCTG (5) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GAGATGCTGG (5) 1.8 0.0018 E16.5 retina GGCACAGCTG (5) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina AAGGGAGTCC 1.8 0.0018 E18.5 retina GGCACAGCTG (5) 1.8 0.0018 E18.5 retina TCTTCAGTTG (5) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GAGATGCTGG (5) 19.6 0.0196 P0.5 retina GGCACAGCTG (5) 3.9 0.0039 P0.5 retina AAGGGAGTCC 2 0.002 P0.5 retina TCTTCCCTGT (2) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina AAGGGAGTCC 3.5 0.0035 P2.5 retina TCTTCAGTTG (5) 3.5 0.0035 P2.5 retina CCAAGTGTTC (3) 1.8 0.0018 P2.5 retina GGCACAGCTG (5) 1.8 0.0018 P2.5 retina TCTTCCCTGT (2) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina AAGGGAGTCC 2 0.002 P4.5 retina GAGATGCTGG (5) 2 0.002 P4.5 retina GGCACAGCTG (5) 2 0.002 P4.5 retina TCTTCAGTTG (5) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CCAAGTGTTC (3) 1.7 0.0017 P6.5 retina GAGATGCTGG (5) 1.7 0.0017 P6.5 retina TCTTCAGTTG (5) 1.7 0.0017 P6.5 retina TCTTCCCTGT (2) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GAGATGCTGG (5) 9.3 0.0093 P10.5 crx- retina GGCACAGCTG (5) 9.3 0.0093 P10.5 crx- retina AAGGGAGTCC 3.7 0.0037 P10.5 crx- retina GTGATGCTGG (4) 3.7 0.0037 P10.5 crx- retina TCTTCAGTTG (5) 3.7 0.0037 P10.5 crx- retina CCAAGTGTTC (3) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GGCACAGCTG (5) 5.8 0.0058 P10.5 crx+ retina GTGATGCTGG (4) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GAGATGCTGG (5) 5.6 0.0056 Adult retinal GGCACAGCTG (5) 3.7 0.0037 Adult retinal AAGGGAGTCC 1.9 0.0019 Adult retinal GTGATGCTGG (4) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTGATGCTGG (4) 3.8 0.0038 ONL GAGATGCTGG (5) 1.9 0.0019 ONL TCTTCAGTTG (5) 1.9 0.0019