Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29685
Dnajc8
DnaJ (Hsp40) homolog, subfamily C, member 8
4
4 D2.3
68598
Human Homolog
DNAJC8[DnaJ (Hsp40) homolog, subfamily C, member 8]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 8 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCTGTGGTG
(
11
)
8.2
0.0082
P8 Cb GC
AAGCTGTTTG
(
4
)
1.6
0.0016
P8 Cb GC
TATAGTTTGT
(
2
)
1.6
0.0016
Cb medulloblastoma
CCCTGTGGTG
(
11
)
6.9
0.0069
Cb medulloblastoma
AAGCTGTTTG
(
4
)
2.3
0.0023
Cb medulloblastoma
AGAGGAAGCG
(
2
)
2.3
0.0023
P8 GC+1d culture
CCCTGTGGTG
(
11
)
8
0.008
P8 GC+SHH+1d culture
CCCTGTGGTG
(
11
)
7
0.007
P8 GC+SHH+1d culture
AAGCTGTTTG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGAGGAAGCG
(
2
)
1.2
0.0012
3T3 fibroblasts
CCCCTGTGGT
(
3
)
28
0.028
3T3 fibroblasts
AGGGCAACAA
(
3
)
3.5
0.0035
3T3 fibroblasts
GGTCCGAAGC
(
3
)
3.5
0.0035
E15 cortex
CCCCTGTGGT
(
3
)
14.8
0.0148
E15 cortex
AAGCTGTTTG
(
4
)
4.9
0.0049
E15 cortex
AGAGGAAGCG
(
2
)
4.9
0.0049
P1 cortex
CCCCCCTGTG
4.5
0.0045
Hypothalamus
AGAGGAAGCG
(
2
)
1.8
0.0018
Hypothalamus
AGGGCAACAA
(
3
)
1.8
0.0018
E12.5 retina
CCCTGTGGTG
(
11
)
11.3
0.0113
E12.5 retina
AAGCTGTTTG
(
4
)
3.8
0.0038
E12.5 retina
TATAGTTTGT
(
2
)
1.9
0.0019
E14.5 retina
CCCTGTGGTG
(
11
)
7.3
0.0073
E14.5 retina
AAGCTGTTTG
(
4
)
1.8
0.0018
E14.5 retina
AGGGCAACAA
(
3
)
1.8
0.0018
E14.5 retina
GGTCCGAAGC
(
3
)
1.8
0.0018
E16.5 retina
CCCTGTGGTG
(
11
)
3.6
0.0036
E16.5 retina
GGTCCGAAGC
(
3
)
3.6
0.0036
E16.5 retina
AAGCTGTTTG
(
4
)
1.8
0.0018
E16.5 retina
AGAGGAAGCG
(
2
)
1.8
0.0018
E16.5 retina
CCCCCCTGTG
1.8
0.0018
E18.5 retina
CCCTGTGGTG
(
11
)
5.5
0.0055
E18.5 retina
AAGCTGTTTG
(
4
)
1.8
0.0018
E18.5 retina
CCCCTGTGGT
(
3
)
1.8
0.0018
E18.5 retina
TATAGTTTGT
(
2
)
1.8
0.0018
P0.5 retina
CCCTGTGGTG
(
11
)
5.9
0.0059
P0.5 retina
AAGCTGTTTG
(
4
)
2
0.002
P0.5 retina
CCCCCCTGTG
2
0.002
P0.5 retina
TATAGTTTGT
(
2
)
2
0.002
P2.5 retina
CCCTGTGGTG
(
11
)
8.8
0.0088
P2.5 retina
TATAGTTTGT
(
2
)
8.8
0.0088
P2.5 retina
AGAGGAAGCG
(
2
)
1.8
0.0018
P2.5 retina
GGTCCGAAGC
(
3
)
1.8
0.0018
P4.5 retina
CCCTGTGGTG
(
11
)
4
0.004
P4.5 retina
TATAGTTTGT
(
2
)
2
0.002
P6.5 retina
CCCTGTGGTG
(
11
)
5
0.005
P6.5 retina
TATAGTTTGT
(
2
)
5
0.005
P10.5 crx- retina
CCCTGTGGTG
(
11
)
14.9
0.0149
P10.5 crx- retina
AGAGGAAGCG
(
2
)
1.9
0.0019
P10.5 crx- retina
TATAGTTTGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
CCCTGTGGTG
(
11
)
11.5
0.0115
P10.5 crx+ retina
TATAGTTTGT
(
2
)
1.9
0.0019
Adult retinal
CCCTGTGGTG
(
11
)
14.8
0.0148
Adult retinal
AAGCTGTTTG
(
4
)
3.7
0.0037
Adult retinal
AGAGGAAGCG
(
2
)
1.9
0.0019
ONL
CCCTGTGGTG
(
11
)
5.7
0.0057
ONL
TATAGTTTGT
(
2
)
1.9
0.0019
