Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29689	Lemd2	LEM domain containing 2	17		224640
Human Homolog	LEMD2[LEM domain containing 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCAGCCAG (9) 112.6 0.1126 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GAGAACACAC (8) 6.5 0.0065 P8 Cb GC AGGCCCTGGG (6) 1.6 0.0016 P8 Cb GC GAGTAGTGTG (5) 1.6 0.0016 P8 Cb GC TCAGAGGTGT (9) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma CCCCAGCCAG (9) 78.6 0.0786 Cb medulloblastoma AGGCCCTGGG (6) 2.3 0.0023 Cb medulloblastoma GAGAACACAC (8) 2.3 0.0023 Cb medulloblastoma TAGCAGTATG 2.3 0.0023 P8 GC+1d culture CCCCAGCCAG (9) 151.8 0.1518 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GAGAACACAC (8) 5.7 0.0057 P8 GC+1d culture GAGTAGTGTG (5) 4.6 0.0046 P8 GC+1d culture TAGCAGTATG 3.4 0.0034 P8 GC+1d culture AAATTGTTGC 2.3 0.0023 P8 GC+1d culture TTCCTGCTTT (2) 1.1 0.0011 P8 GC+SHH+1d culture CCCCAGCCAG (9) 139.3 0.1393 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GAGAACACAC (8) 10.5 0.0105 P8 GC+SHH+1d culture GGGCCTCTGG (4) 2.3 0.0023 P8 GC+SHH+1d culture TAGCAGTATG 2.3 0.0023 P8 GC+SHH+1d culture AGGCCCTGGG (6) 1.2 0.0012 P8 GC+SHH+1d culture GAGTAGTGTG (5) 1.2 0.0012 3T3 fibroblasts CCCCAGCCAG (9) 308.4 0.3084 3T3 fibroblasts GAGAACACAC (8) 7 0.007 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TAGCAGTATG 3.5 0.0035 E15 cortex CCCCAGCCAG (9) 188 0.188 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex CCCCAGCCAG (9) 72.7 0.0727 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex AGGCCCTGGG (6) 4.5 0.0045 P1 cortex TTGGGTAATC (3) 4.5 0.0045 Hypothalamus CCCCAGCCAG (9) 74.3 0.0743 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TCAGAGGTGT (9) 5.4 0.0054 Hypothalamus GAGAACACAC (8) 3.6 0.0036 Hypothalamus GGGCCTCTGG (4) 3.6 0.0036 Hypothalamus TAGCAGTATG 1.8 0.0018 E12.5 retina CCCCAGCCAG (9) 255.3 0.2553 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina GAGAACACAC (8) 5.6 0.0056 E12.5 retina AGGCCCTGGG (6) 3.8 0.0038 E12.5 retina GGGCCTCTGG (4) 1.9 0.0019 E14.5 retina CCCCAGCCAG (9) 235 0.235 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina AGGCCCTGGG (6) 7.3 0.0073 E14.5 retina TAGCAGTATG 5.5 0.0055 E14.5 retina GAGAACACAC (8) 3.6 0.0036 E14.5 retina AAATTGTTGC 1.8 0.0018 E16.5 retina CCCCAGCCAG (9) 268.1 0.2681 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina AGGCCCTGGG (6) 3.6 0.0036 E16.5 retina GAGTAGTGTG (5) 3.6 0.0036 E16.5 retina GGGCCTCTGG (4) 3.6 0.0036 E16.5 retina CCCCAGAGCT (3) 1.8 0.0018 E16.5 retina TAGCAGTATG 1.8 0.0018 E18.5 retina CCCCAGCCAG (9) 174.6 0.1746 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GAGAACACAC (8) 7.3 0.0073 E18.5 retina GGGCCTCTGG (4) 3.6 0.0036 E18.5 retina AGGCCCTGGG (6) 1.8 0.0018 P0.5 retina CCCCAGCCAG (9) 176.6 0.1766 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TAGCAGTATG 11.8 0.0118 P0.5 retina GAGAACACAC (8) 7.9 0.0079 P0.5 retina GGGCCTCTGG (4) 3.9 0.0039 P0.5 retina AGGCCCTGGG (6) 2 0.002 P0.5 retina GAGTAGTGTG (5) 2 0.002 P2.5 retina CCCCAGCCAG (9) 126.7 0.1267 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TAGCAGTATG 5.3 0.0053 P2.5 retina AGGCCCTGGG (6) 3.5 0.0035 P2.5 retina GAGAACACAC (8) 3.5 0.0035 P2.5 retina GGGCCTCTGG (4) 3.5 0.0035 P2.5 retina TTCCTGCTTT (2) 1.8 0.0018 P4.5 retina CCCCAGCCAG (9) 144.6 0.1446 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GAGAACACAC (8) 7.9 0.0079 P4.5 retina TAGCAGTATG 5.9 0.0059 P4.5 retina AGGCCCTGGG (6) 4 0.004 P4.5 retina GGGCCTCTGG (4) 4 0.004 P4.5 retina TCAGAGGTGT (9) 4 0.004 P4.5 retina CCCCAGAGCT (3) 2 0.002 P4.5 retina GAGTAGTGTG (5) 2 0.002 P6.5 retina CCCCAGCCAG (9) 106.7 0.1067 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GAGAACACAC (8) 6.7 0.0067 P6.5 retina GGGCCTCTGG (4) 6.7 0.0067 P6.5 retina TAGCAGTATG 6.7 0.0067 P6.5 retina AGGCCCTGGG (6) 1.7 0.0017 P6.5 retina GAGTAGTGTG (5) 1.7 0.0017 P10.5 crx- retina CCCCAGCCAG (9) 87.3 0.0873 P10.5 crx- retina GAGAACACAC (8) 11.1 0.0111 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina CCCCAGAGCT (3) 3.7 0.0037 P10.5 crx- retina TAGCAGTATG 3.7 0.0037 P10.5 crx- retina TCAGAGGTGT (9) 3.7 0.0037 P10.5 crx- retina TTCCTGCTTT (2) 1.9 0.0019 P10.5 crx+ retina CCCCAGCCAG (9) 82.7 0.0827 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GGGCCTCTGG (4) 1.9 0.0019 Adult retinal CCCCAGCCAG (9) 74.1 0.0741 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TAGCAGTATG 5.6 0.0056 Adult retinal TTGGGTAATC (3) 3.7 0.0037 Adult retinal GAGAACACAC (8) 1.9 0.0019 Adult retinal GGGCCTCTGG (4) 1.9 0.0019 ONL CCCCAGCCAG (9) 30.6 0.0306 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL GAGAACACAC (8) 3.8 0.0038 ONL GGGCCTCTGG (4) 3.8 0.0038 ONL TAGCAGTATG 1.9 0.0019