Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296976	Srp72	signal recognition particle 72	5		66661
Gene Ontology	molecular_function unknown | signal recognition particle | SRP-dependent cotranslational membrane targeting
Human Homolog	SRP72[signal recognition particle 72kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCACAACTTG (6) 220.2 0.2202 P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CACATTAATA 4.9 0.0049 P8 Cb GC TCTCTAAAAG (3) 3.3 0.0033 P8 Cb GC CACATTAAAA 1.6 0.0016 P8 Cb GC CAGCTGCAGG 1.6 0.0016 P8 Cb GC CTTAGTATTC 1.6 0.0016 P8 Cb GC TATACAAACC (2) 1.6 0.0016 Cb medulloblastoma GCACAACTTG (6) 578.1 0.5781 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CACATTAATA 2.3 0.0023 Cb medulloblastoma TTTACAAACC (4) 2.3 0.0023 P8 GC+1d culture GCACAACTTG (6) 251.1 0.2511 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CACATTAATA 2.3 0.0023 P8 GC+1d culture ATGTCTTAGA 1.1 0.0011 P8 GC+1d culture TATACAAACC (2) 1.1 0.0011 P8 GC+1d culture TCTCTAAAAG (3) 1.1 0.0011 P8 GC+1d culture TTTACAAACC (4) 1.1 0.0011 P8 GC+SHH+1d culture GCACAACTTG (6) 265.8 0.2658 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CACATTAATA 3.5 0.0035 P8 GC+SHH+1d culture CTTAGTATTC 3.5 0.0035 P8 GC+SHH+1d culture CACATTAAAA 1.2 0.0012 P8 GC+SHH+1d culture TTTACAAACC (4) 1.2 0.0012 3T3 fibroblasts GCACAACTTG (6) 73.6 0.0736 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex GCACAACTTG (6) 197.9 0.1979 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TCTCTAAAAG (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GCACAACTTG (6) 90.9 0.0909 P1 cortex CAGCTGCAGG 4.5 0.0045 Hypothalamus GCACAACTTG (6) 231.8 0.2318 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus ATGTCTTAGA 1.8 0.0018 Hypothalamus CTTAGTATTC 1.8 0.0018 E12.5 retina GCACAACTTG (6) 95.7 0.0957 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CACATTAAAA 3.8 0.0038 E12.5 retina CACATTAATA 3.8 0.0038 E12.5 retina ATGTCTTAGA 1.9 0.0019 E12.5 retina CTTAGTATTC 1.9 0.0019 E14.5 retina GCACAACTTG (6) 133 0.133 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CACATTAAAA 3.6 0.0036 E14.5 retina CACATTAATA 3.6 0.0036 E14.5 retina TATACAAACC (2) 3.6 0.0036 E16.5 retina GCACAACTTG (6) 161.2 0.1612 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TTTACAAACC (4) 3.6 0.0036 E16.5 retina CACATTAATA 1.8 0.0018 E16.5 retina CTTAGTATTC 1.8 0.0018 E16.5 retina TATACAAACC (2) 1.8 0.0018 E18.5 retina GCACAACTTG (6) 243.7 0.2437 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CACATTAATA 12.7 0.0127 E18.5 retina CACATTAAAA 1.8 0.0018 E18.5 retina TCTCTAAAAG (3) 1.8 0.0018 P0.5 retina GCACAACTTG (6) 217.8 0.2178 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TCTCTAAAAG (3) 2 0.002 P2.5 retina GCACAACTTG (6) 172.5 0.1725 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CACATTAATA 1.8 0.0018 P2.5 retina TATACAAACC (2) 1.8 0.0018 P4.5 retina GCACAACTTG (6) 194.2 0.1942 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CACATTAATA 4 0.004 P4.5 retina CACATTAAAA 2 0.002 P4.5 retina TTTACAAACC (4) 2 0.002 P6.5 retina GCACAACTTG (6) 143.4 0.1434 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CACATTAATA 1.7 0.0017 P6.5 retina TCTCTAAAAG (3) 1.7 0.0017 P10.5 crx- retina GCACAACTTG (6) 206.2 0.2062 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CACATTAATA 7.4 0.0074 P10.5 crx- retina CTTAGTATTC 3.7 0.0037 P10.5 crx+ retina GCACAACTTG (6) 288.4 0.2884 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CACATTAATA 3.8 0.0038 P10.5 crx+ retina CACATTAAAA 1.9 0.0019 P10.5 crx+ retina CTTAGTATTC 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GCACAACTTG (6) 94.4 0.0944 Adult retinal CACATTAATA 3.7 0.0037 Adult retinal TATACAAACC (2) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GCACAACTTG (6) 40.2 0.0402 ONL CACATTAATA 3.8 0.0038