Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296985	2610204B21Rik	RIKEN cDNA 2610204B21 gene	11		67165
Mm.296985	Cct4	chaperonin subunit 4 (delta)	11	11 13.0 cM	12464
Gene Ontology	ATP binding | protein folding
Human Homolog	CCT4[chaperonin containing TCP1, subunit 4 (delta)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 118 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATTCAAAG (9) 8.2 0.0082 P8 Cb GC CCCAAGGAGA (4) 3.3 0.0033 P8 Cb GC AAGGTCTCTG (3) 1.6 0.0016 P8 Cb GC CCAGCCACAG (7) 1.6 0.0016 P8 Cb GC CCCAAGAGAA (5) 1.6 0.0016 P8 Cb GC GCGGTTTTTT (4) 1.6 0.0016 P8 Cb GC GGAAGAGGGA (5) 1.6 0.0016 Cb medulloblastoma AAGGTCTCTG (3) 4.6 0.0046 Cb medulloblastoma CAGTACTCTT (2) 4.6 0.0046 Cb medulloblastoma GAATTCAAAG (9) 4.6 0.0046 Cb medulloblastoma GCGGTTTTTT (4) 4.6 0.0046 Cb medulloblastoma ATTGTAAATT (2) 2.3 0.0023 Cb medulloblastoma CCCCAGGAGA (4) 2.3 0.0023 Cb medulloblastoma GAAATTTATA (8) 2.3 0.0023 Cb medulloblastoma GGCTTGAGTT (2) 2.3 0.0023 P8 GC+1d culture GAATTCAAAG (9) 9.1 0.0091 P8 GC+1d culture CCCAAGGAGA (4) 5.7 0.0057 P8 GC+1d culture AAGGTCTCTG (3) 4.6 0.0046 P8 GC+1d culture CCAGCCACAG (7) 3.4 0.0034 P8 GC+1d culture ATTGTAAATT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAGGTCTCTG (3) 12.9 0.0129 P8 GC+SHH+1d culture GAATTCAAAG (9) 9.4 0.0094 P8 GC+SHH+1d culture CCAGCCACAG (7) 3.5 0.0035 P8 GC+SHH+1d culture CCCCAGGAGA (4) 3.5 0.0035 P8 GC+SHH+1d culture CCCAAGAGAA (5) 2.3 0.0023 P8 GC+SHH+1d culture CCCAAGGAGA (4) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTAGTTT (7) 2.3 0.0023 P8 GC+SHH+1d culture GGCTTGAGTT (2) 1.2 0.0012 3T3 fibroblasts CCCAAGGAGA (4) 38.6 0.0386 E15 cortex CCCAAGAGAA (5) 4.9 0.0049 E15 cortex CCCAAGGAGA (4) 4.9 0.0049 E15 cortex GAATTCAAAG (9) 4.9 0.0049 E15 cortex GGCTTGAGTT (2) 4.9 0.0049 P1 cortex GGAAGAGGGA (5) 9.1 0.0091 P1 cortex ATTGTAAATT (2) 4.5 0.0045 P1 cortex CCAGCCACAG (7) 4.5 0.0045 P1 cortex CCCAAGGAGA (4) 4.5 0.0045 P1 cortex GAATTCAAAG (9) 4.5 0.0045 Hypothalamus CCCAAGGAGA (4) 3.6 0.0036 Hypothalamus ATGCTATGGA (3) 1.8 0.0018 E12.5 retina GAATTCAAAG (9) 9.4 0.0094 E12.5 retina AAGGTCTCTG (3) 5.6 0.0056 E12.5 retina CCCAAGGAGA (4) 3.8 0.0038 E12.5 retina GGAAGAGGGA (5) 3.8 0.0038 E12.5 retina ATTGTAAATT (2) 1.9 0.0019 E12.5 retina CAGTACTCTT (2) 1.9 0.0019 E12.5 retina CCAGCCACAG (7) 1.9 0.0019 E14.5 retina AAGGTCTCTG (3) 7.3 0.0073 E14.5 retina CCAGCCACAG (7) 1.8 0.0018 E14.5 retina CCCAAGAGAA (5) 1.8 0.0018 E14.5 retina CCCAAGGAGA (4) 1.8 0.0018 E14.5 retina GAATTCAAAG (9) 1.8 0.0018 E14.5 retina GGAAGAGGGA (5) 1.8 0.0018 E16.5 retina CAGTACTCTT (2) 5.4 0.0054 E16.5 retina CCCAAGAGAA (5) 5.4 0.0054 E16.5 retina GAATTCAAAG (9) 5.4 0.0054 E16.5 retina GGAAGAGGGA (5) 5.4 0.0054 E16.5 retina CCAGCCACAG (7) 3.6 0.0036 E16.5 retina CCCAAGGAGA (4) 3.6 0.0036 E16.5 retina GTGGAGAATG (3) 3.6 0.0036 E16.5 retina ATGCTATGGA (3) 1.8 0.0018 E16.5 retina ATTGTAAATT (2) 1.8 0.0018 E18.5 retina AAGGTCTCTG (3) 5.5 0.0055 E18.5 retina GGAAGAGGGA (5) 3.6 0.0036 E18.5 retina ATTGTAAATT (2) 1.8 0.0018 E18.5 retina CCAGCCACAG (7) 1.8 0.0018 P0.5 retina CCCAAGGAGA (4) 7.9 0.0079 P0.5 retina ATGCTATGGA (3) 2 0.002 P0.5 retina CCAGCCACAG (7) 2 0.002 P0.5 retina GAATTCAAAG (9) 2 0.002 P2.5 retina GAATTCAAAG (9) 8.8 0.0088 P2.5 retina AAGGTCTCTG (3) 3.5 0.0035 P2.5 retina CCAGCCACAG (7) 1.8 0.0018 P2.5 retina CCCAAGAGAA (5) 1.8 0.0018 P2.5 retina CCCAAGGAGA (4) 1.8 0.0018 P2.5 retina CCCCAGGAGA (4) 1.8 0.0018 P2.5 retina CCTTTAGTTT (7) 1.8 0.0018 P2.5 retina GAAATTTATA (8) 1.8 0.0018 P2.5 retina GGAAGAGGGA (5) 1.8 0.0018 P4.5 retina AAGGTCTCTG (3) 11.9 0.0119 P4.5 retina GAATTCAAAG (9) 5.9 0.0059 P4.5 retina GGAAGAGGGA (5) 4 0.004 P4.5 retina CCCCAGGAGA (4) 2 0.002 P4.5 retina CCTTTAGTTT (7) 2 0.002 P4.5 retina GAAATTTATA (8) 2 0.002 P4.5 retina GGCTTGAGTT (2) 2 0.002 P6.5 retina CCCAAGGAGA (4) 6.7 0.0067 P6.5 retina CCCCAGGAGA (4) 5 0.005 P6.5 retina GAATTCAAAG (9) 5 0.005 P6.5 retina AAGGTCTCTG (3) 3.3 0.0033 P6.5 retina CAGTACTCTT (2) 3.3 0.0033 P6.5 retina ATTGTAAATT (2) 1.7 0.0017 P6.5 retina CCAGCCACAG (7) 1.7 0.0017 P6.5 retina GCGGTTTTTT (4) 1.7 0.0017 P6.5 retina GGAAGAGGGA (5) 1.7 0.0017 P10.5 crx- retina AAGGTCTCTG (3) 7.4 0.0074 P10.5 crx- retina CCAGCCACAG (7) 5.6 0.0056 P10.5 crx- retina CCCAAGGAGA (4) 5.6 0.0056 P10.5 crx- retina CCCCAGGAGA (4) 5.6 0.0056 P10.5 crx- retina GAATTCAAAG (9) 3.7 0.0037 P10.5 crx- retina ATTGTAAATT (2) 1.9 0.0019 P10.5 crx- retina CCTTTAGTTT (7) 1.9 0.0019 P10.5 crx+ retina AAGGTCTCTG (3) 7.7 0.0077 P10.5 crx+ retina CCCAAGGAGA (4) 1.9 0.0019 P10.5 crx+ retina GGAAGAGGGA (5) 1.9 0.0019 Adult retinal CCAGCCACAG (7) 7.4 0.0074 Adult retinal AAGGTCTCTG (3) 5.6 0.0056 Adult retinal CCCAAGGAGA (4) 5.6 0.0056 Adult retinal CCCCAGGAGA (4) 5.6 0.0056 Adult retinal GAATTCAAAG (9) 5.6 0.0056 Adult retinal ATGCTATGGA (3) 1.9 0.0019 Adult retinal GCGGTTTTTT (4) 1.9 0.0019 ONL AAGGTCTCTG (3) 9.6 0.0096 ONL CCCAAGGAGA (4) 9.6 0.0096 ONL GAATTCAAAG (9) 5.7 0.0057 ONL CCAGCCACAG (7) 3.8 0.0038 ONL CCCCAGGAGA (4) 3.8 0.0038 ONL GTGGAGAATG (3) 1.9 0.0019