Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29702	D3Ucla1	DNA segment, Chr 3, University of California at Los Angeles 1	3	3 31.8 cM	28146
Human Homolog	SERP1[stress-associated endoplasmic reticulum protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 131 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATTTACCT (2) 11.4 0.0114 P8 Cb GC ACTGTGTCTG (3) 8.2 0.0082 P8 Cb GC AATAAAGCAA (2) 3.3 0.0033 P8 Cb GC AGCCTACAGA (5) 3.3 0.0033 P8 Cb GC TAATTGCACT (2) 3.3 0.0033 P8 Cb GC AATAAAGCCA (3) 1.6 0.0016 P8 Cb GC ACTGTTGTCT 1.6 0.0016 P8 Cb GC ATACAAAGGG 1.6 0.0016 Cb medulloblastoma AATAAAGCCA (3) 71.7 0.0717 Cb medulloblastoma ACTGTGTCTG (3) 6.9 0.0069 Cb medulloblastoma AGCCTACAGA (5) 6.9 0.0069 Cb medulloblastoma CCAGGCTGTC (5) 4.6 0.0046 Cb medulloblastoma GTAATATTTA (5) 4.6 0.0046 Cb medulloblastoma AATAAAGCAA (2) 2.3 0.0023 Cb medulloblastoma TAATTGCACT (2) 2.3 0.0023 Cb medulloblastoma TAATTTACCT (2) 2.3 0.0023 P8 GC+1d culture TAATTTACCT (2) 10.3 0.0103 P8 GC+1d culture ACTGTGTCTG (3) 4.6 0.0046 P8 GC+1d culture TAATTGCACT (2) 3.4 0.0034 P8 GC+1d culture AATAAAGCCA (3) 2.3 0.0023 P8 GC+1d culture AAATAAAGCA (11) 1.1 0.0011 P8 GC+1d culture AATAAAGCAA (2) 1.1 0.0011 P8 GC+1d culture GTAATATTTA (5) 1.1 0.0011 P8 GC+1d culture GTGACTCAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture TAATTTACCT (2) 10.5 0.0105 P8 GC+SHH+1d culture AAATAAAGCA (11) 4.7 0.0047 P8 GC+SHH+1d culture ACTGTGTCTG (3) 4.7 0.0047 P8 GC+SHH+1d culture AATAAAGCCA (3) 3.5 0.0035 P8 GC+SHH+1d culture AATAAAGCAA (2) 2.3 0.0023 P8 GC+SHH+1d culture GTGACTCAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TAATTGCACT (2) 2.3 0.0023 P8 GC+SHH+1d culture AGCCTACAGA (5) 1.2 0.0012 P8 GC+SHH+1d culture GCGGCGAAAA (2) 1.2 0.0012 3T3 fibroblasts GCGGCGAAAA (2) 10.5 0.0105 E15 cortex ACTGTGTCTG (3) 4.9 0.0049 E15 cortex AGCCTACAGA (5) 4.9 0.0049 P1 cortex AATAAAGCCA (3) 9.1 0.0091 Hypothalamus AATAAAGCCA (3) 85.1 0.0851 Hypothalamus AGCCTACAGA (5) 5.4 0.0054 Hypothalamus ACTGTGTCTG (3) 3.6 0.0036 Hypothalamus GTGACTCAAA (2) 3.6 0.0036 Hypothalamus TAATTGCACT (2) 3.6 0.0036 Hypothalamus TAATTTACCT (2) 3.6 0.0036 Hypothalamus AAATAAAGCA (11) 1.8 0.0018 E12.5 retina AATAAAGCCA (3) 11.3 0.0113 E12.5 retina AGCCTACAGA (5) 7.5 0.0075 E12.5 retina TAATTGCACT (2) 5.6 0.0056 E12.5 retina TAATTTACCT (2) 3.8 0.0038 E12.5 retina AAATAAAGCA (11) 1.9 0.0019 E12.5 retina ACTGTGTCTG (3) 1.9 0.0019 E12.5 retina CCAGGCTGTC (5) 1.9 0.0019 E12.5 retina GTGACTCAAA (2) 1.9 0.0019 E12.5 retina TTAATTGCAC (2) 1.9 0.0019 E14.5 retina ACTGTGTCTG (3) 7.3 0.0073 E14.5 retina AATAAAGCAA (2) 3.6 0.0036 E14.5 retina ATACAAAGGG 3.6 0.0036 E14.5 retina CCCATCCTGA (2) 1.8 0.0018 E14.5 retina GTAATATTTA (5) 1.8 0.0018 E14.5 retina GTGACTCAAA (2) 1.8 0.0018 E14.5 retina TAATTGCACT (2) 1.8 0.0018 E16.5 retina ACTGTGTCTG (3) 5.4 0.0054 E16.5 retina AAATAAAGCA (11) 3.6 0.0036 E16.5 retina AGCCTACAGA (5) 3.6 0.0036 E16.5 retina AATAAAGCCA (3) 1.8 0.0018 E16.5 retina ACTGTTGTCT 1.8 0.0018 E16.5 retina TAATTGCACT (2) 1.8 0.0018 E16.5 retina TAATTTACCT (2) 1.8 0.0018 E18.5 retina AATAAAGCCA (3) 14.6 0.0146 E18.5 retina TAATTTACCT (2) 5.5 0.0055 E18.5 retina AAATAAAGCA (11) 3.6 0.0036 E18.5 retina AATAAAGCAA (2) 3.6 0.0036 E18.5 retina ACTGTGTCTG (3) 1.8 0.0018 E18.5 retina GTAATATTTA (5) 1.8 0.0018 E18.5 retina GTGACTCAAA (2) 1.8 0.0018 P0.5 retina ACTGTGTCTG (3) 11.8 0.0118 P0.5 retina AATAAAGCCA (3) 3.9 0.0039 P0.5 retina AGCCTACAGA (5) 3.9 0.0039 P0.5 retina CCCATCCTGA (2) 3.9 0.0039 P0.5 retina TAATTTACCT (2) 3.9 0.0039 P0.5 retina AAATAAAGCA (11) 2 0.002 P0.5 retina GTGACTCAAA (2) 2 0.002 P2.5 retina AATAAAGCCA (3) 8.8 0.0088 P2.5 retina ACTGTGTCTG (3) 5.3 0.0053 P2.5 retina GTAATATTTA (5) 3.5 0.0035 P2.5 retina TAATTGCACT (2) 3.5 0.0035 P2.5 retina TAATTTACCT (2) 3.5 0.0035 P2.5 retina AAATAAAGCA (11) 1.8 0.0018 P2.5 retina AATAAAGCAA (2) 1.8 0.0018 P2.5 retina ACCTGATTTA 1.8 0.0018 P2.5 retina GTGACTCAAA (2) 1.8 0.0018 P4.5 retina AATAAAGCCA (3) 33.7 0.0337 P4.5 retina TAATTTACCT (2) 7.9 0.0079 P4.5 retina ATACAAAGGG 4 0.004 P4.5 retina AAATAAAGCA (11) 2 0.002 P4.5 retina ACTGTGTCTG (3) 2 0.002 P4.5 retina AGCCTACAGA (5) 2 0.002 P4.5 retina TAATTGCACT (2) 2 0.002 P6.5 retina AATAAAGCCA (3) 51.7 0.0517 P6.5 retina CTTATTGGAC (3) 5 0.005 P6.5 retina GTGACTCAAA (2) 5 0.005 P6.5 retina GTAATATTTA (5) 3.3 0.0033 P6.5 retina TAATTGCACT (2) 3.3 0.0033 P6.5 retina TAATTTACCT (2) 3.3 0.0033 P6.5 retina AAATAAAGCA (11) 1.7 0.0017 P6.5 retina ACCTGATTTA 1.7 0.0017 P6.5 retina ACTGTGTCTG (3) 1.7 0.0017 P6.5 retina ACTGTTGTCT 1.7 0.0017 P10.5 crx- retina AATAAAGCCA (3) 91 0.091 P10.5 crx- retina ACTGTGTCTG (3) 7.4 0.0074 P10.5 crx- retina TAATTTACCT (2) 5.6 0.0056 P10.5 crx- retina TAATTGCACT (2) 3.7 0.0037 P10.5 crx- retina AAATAAAGCA (11) 1.9 0.0019 P10.5 crx+ retina AATAAAGCCA (3) 57.7 0.0577 P10.5 crx+ retina ACTGTGTCTG (3) 5.8 0.0058 P10.5 crx+ retina AGCCTACAGA (5) 3.8 0.0038 P10.5 crx+ retina TAATTTACCT (2) 3.8 0.0038 P10.5 crx+ retina GTGACTCAAA (2) 1.9 0.0019 Adult retinal AATAAAGCCA (3) 63 0.063 Adult retinal GTGACTCAAA (2) 3.7 0.0037 Adult retinal ACCTGATTTA 1.9 0.0019 Adult retinal ACTGTGTCTG (3) 1.9 0.0019 Adult retinal AGCCTACAGA (5) 1.9 0.0019 Adult retinal CTTATTGGAC (3) 1.9 0.0019 Adult retinal GCGGCGAAAA (2) 1.9 0.0019 Adult retinal GTAATATTTA (5) 1.9 0.0019 Adult retinal TAATTGCACT (2) 1.9 0.0019 Adult retinal TTAATTGCAC (2) 1.9 0.0019 ONL AATAAAGCCA (3) 40.2 0.0402 ONL ACTGTGTCTG (3) 3.8 0.0038 ONL TAATTTACCT (2) 3.8 0.0038 ONL AGCCTACAGA (5) 1.9 0.0019