Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29729
Ttyh1
tweety homolog 1 (Drosophila)
7
7 A1
57776
Human Homolog
TTYH1[tweety homolog 1 (Drosophila)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 11 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGCTCTGGG
(
6
)
1.6
0.0016
P8 Cb GC
TGAATCCTGA (
7
)
1.6
0.0016
P8 Cb GC
TTGCATTTGT
(
2
)
1.6
0.0016
Cb medulloblastoma
GCAAAGAAAA
(
3
)
16.2
0.0162
Cb medulloblastoma
TTGCATTTGT
(
2
)
9.2
0.0092
Cb medulloblastoma
ATGCTCTGGG
(
6
)
6.9
0.0069
Cb medulloblastoma
TGAGAGGATA
6.9
0.0069
Cb medulloblastoma
AGTCTCCTGG
(
6
)
2.3
0.0023
P8 GC+1d culture
TGAGAGGAAA (
6
)
2.3
0.0023
P8 GC+1d culture
GCAAAGAAAA
(
3
)
1.1
0.0011
P8 GC+1d culture
TGAATCCTGA (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TGAATCCTGA (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GCAAAGAAAA
(
3
)
1.2
0.0012
E15 cortex
GGGCCAAGAG
(
3
)
4.9
0.0049
E15 cortex
TGAGAGGAAA (
6
)
4.9
0.0049
Hypothalamus
GCAAAGAAAA
(
3
)
9.1
0.0091
Hypothalamus
TTGCATTTGT
(
2
)
5.4
0.0054
Hypothalamus
ATGCTCTGGG
(
6
)
3.6
0.0036
Hypothalamus
AGTCTCCTGG
(
6
)
1.8
0.0018
Hypothalamus
GCAGAGTCAA
1.8
0.0018
Hypothalamus
TGAATCCTGA (
7
)
1.8
0.0018
E12.5 retina
TGAATCCTGA (
7
)
1.9
0.0019
E14.5 retina
ATGCTCTGGG
(
6
)
1.8
0.0018
E14.5 retina
TGAATCCTGA (
7
)
1.8
0.0018
E16.5 retina
TGAATCCTGA (
7
)
3.6
0.0036
E16.5 retina
AGACTCTTAA
(
2
)
1.8
0.0018
E16.5 retina
GGGCCAAGAG
(
3
)
1.8
0.0018
E18.5 retina
GCAAAGAAAA
(
3
)
3.6
0.0036
E18.5 retina
GCAGAGTCAA
1.8
0.0018
E18.5 retina
TTGCATTTGT
(
2
)
1.8
0.0018
P0.5 retina
GCAAAGAAAA
(
3
)
7.9
0.0079
P0.5 retina
ATGCTCTGGG
(
6
)
3.9
0.0039
P0.5 retina
TGAATCCTGA (
7
)
2
0.002
P0.5 retina
TGAGAGGATA
2
0.002
P0.5 retina
TTGCATTTGT
(
2
)
2
0.002
P2.5 retina
GCAAAGAAAA
(
3
)
3.5
0.0035
P2.5 retina
AGTCTCCTGG
(
6
)
1.8
0.0018
P2.5 retina
TGAATCCTGA (
7
)
1.8
0.0018
P2.5 retina
TTGCATTTGT
(
2
)
1.8
0.0018
P4.5 retina
TTGCATTTGT
(
2
)
5.9
0.0059
P4.5 retina
GCAAAGAAAA
(
3
)
4
0.004
P4.5 retina
AGTCTCCTGG
(
6
)
2
0.002
P4.5 retina
GGGCCAAGAG
(
3
)
2
0.002
P4.5 retina
TGAATCCTGA (
7
)
2
0.002
P4.5 retina
TGAGAGGAAA (
6
)
2
0.002
P6.5 retina
GCAAAGAAAA
(
3
)
6.7
0.0067
P6.5 retina
TTGCATTTGT
(
2
)
6.7
0.0067
P6.5 retina
AGTCTCCTGG
(
6
)
1.7
0.0017
P10.5 crx- retina
GCAAAGAAAA
(
3
)
9.3
0.0093
P10.5 crx- retina
AGACTCTTAA
(
2
)
1.9
0.0019
P10.5 crx- retina
ATGCTCTGGG
(
6
)
1.9
0.0019
P10.5 crx- retina
TGAGAGGATA
1.9
0.0019
P10.5 crx- retina
TTGCATTTGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCAAAGAAAA
(
3
)
7.7
0.0077
P10.5 crx+ retina
ATGCTCTGGG
(
6
)
3.8
0.0038
P10.5 crx+ retina
TGAGAGGATA
1.9
0.0019
P10.5 crx+ retina
TTGCATTTGT
(
2
)
1.9
0.0019
Adult retinal
GCAAAGAAAA
(
3
)
9.3
0.0093
Adult retinal
AGTCTCCTGG
(
6
)
5.6
0.0056
Adult retinal
GCAGAGTCAA
3.7
0.0037
Adult retinal
ATGCTCTGGG
(
6
)
1.9
0.0019
Adult retinal
TGAATCCTGA (
7
)
1.9
0.0019
Adult retinal
TGAGAGGAAA (
6
)
1.9
0.0019
Adult retinal
TTGCATTTGT
(
2
)
1.9
0.0019
ONL
GCAAAGAAAA
(
3
)
3.8
0.0038
ONL
TTGCATTTGT
(
2
)
3.8
0.0038
