Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29743
Sf3b5
splicing factor 3b, subunit 5
10
66125
Human Homolog
SF3B5[splicing factor 3b, subunit 5, 10kDa]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGAGACTGT
(
4
)
8.2
0.0082
P8 Cb GC
GAAGGACTGG (
3
)
3.3
0.0033
Cb medulloblastoma
GAAGGACTGG (
3
)
4.6
0.0046
Cb medulloblastoma
GAAGAGACTG
2.3
0.0023
Cb medulloblastoma
GAGAGACTGT
(
4
)
2.3
0.0023
P8 GC+1d culture
GAGAGACTGT
(
4
)
9.1
0.0091
P8 GC+1d culture
GAAGGACTGG (
3
)
5.7
0.0057
P8 GC+SHH+1d culture
GAAGGACTGG (
3
)
8.2
0.0082
P8 GC+SHH+1d culture
GAGAGACTGT
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
GAAGAGACTG
1.2
0.0012
3T3 fibroblasts
GAGAGACTGT
(
4
)
7
0.007
E15 cortex
GAGAGACTGT
(
4
)
9.9
0.0099
E15 cortex
GCGACTGGGA (
2
)
4.9
0.0049
P1 cortex
GAAGGACTGG (
3
)
4.5
0.0045
P1 cortex
GAGAGACTGT
(
4
)
4.5
0.0045
Hypothalamus
GAAGGACTGG (
3
)
5.4
0.0054
Hypothalamus
GAGAGACTGT
(
4
)
5.4
0.0054
Hypothalamus
GAAGAGACTG
1.8
0.0018
Hypothalamus
GGCCACTTCG
(
2
)
1.8
0.0018
Hypothalamus
TGATCTCAAT
1.8
0.0018
E12.5 retina
GAGAGACTGT
(
4
)
7.5
0.0075
E12.5 retina
TGATCTCAAT
7.5
0.0075
E12.5 retina
GAAGAGACTG
1.9
0.0019
E12.5 retina
GAAGGACTGG (
3
)
1.9
0.0019
E14.5 retina
GAGAGACTGT
(
4
)
3.6
0.0036
E14.5 retina
GAAGGACTGG (
3
)
1.8
0.0018
E16.5 retina
GAGAGACTGT
(
4
)
10.9
0.0109
E16.5 retina
GAAGGACTGG (
3
)
1.8
0.0018
E16.5 retina
GGCCACTTCG
(
2
)
1.8
0.0018
E18.5 retina
GAAGGACTGG (
3
)
9.1
0.0091
E18.5 retina
GAGAGACTGT
(
4
)
5.5
0.0055
E18.5 retina
TGATCTCAAT
1.8
0.0018
P0.5 retina
GAGAGACTGT
(
4
)
5.9
0.0059
P0.5 retina
GGCCACTTCG
(
2
)
2
0.002
P2.5 retina
GAAGGACTGG (
3
)
8.8
0.0088
P2.5 retina
GAGAGACTGT
(
4
)
7
0.007
P4.5 retina
GAAGGACTGG (
3
)
9.9
0.0099
P4.5 retina
GAGAGACTGT
(
4
)
2
0.002
P6.5 retina
GAAGGACTGG (
3
)
6.7
0.0067
P6.5 retina
GAAGAGACTG
3.3
0.0033
P6.5 retina
GAGAGACTGT
(
4
)
1.7
0.0017
P10.5 crx- retina
GAGAGACTGT
(
4
)
9.3
0.0093
P10.5 crx- retina
GAAGGACTGG (
3
)
3.7
0.0037
P10.5 crx- retina
GCGACTGGGA (
2
)
1.9
0.0019
P10.5 crx+ retina
GAAGGACTGG (
3
)
3.8
0.0038
P10.5 crx+ retina
GAGAGACTGT
(
4
)
3.8
0.0038
Adult retinal
GAAGGACTGG (
3
)
7.4
0.0074
Adult retinal
GAGAGACTGT
(
4
)
5.6
0.0056
ONL
GAAGGACTGG (
3
)
9.6
0.0096
ONL
GAGAGACTGT
(
4
)
1.9
0.0019
ONL
GCGACTGGGA (
2
)
1.9
0.0019
ONL
TGATCTCAAT
1.9
0.0019
