Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297440	Ran	RAN, member RAS oncogene family	5		19384
Gene Ontology	cell growth and/or maintenance | chromatin | DNA metabolism | GTP binding | GTPase activity | intracellular | intracellular protein transport | mitosis | mitotic spindle assembly | nuclear pore | nucleus | protein binding | protein transport | protein transporter activity | protein-nucleus export | protein-nucleus import | regulation of cell cycle | RNA-nucleus export | signal transduction | small GTPase mediated signal transduction
Human Homolog	RAN[RAN, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTAGAGGT (5) 26.1 0.0261 P8 Cb GC GATTTAAAGG (2) 13.1 0.0131 Cb medulloblastoma CGCATACATA (4) 2.3 0.0023 Cb medulloblastoma GTAGGCTGTT (3) 2.3 0.0023 P8 GC+1d culture ATTTAGAGGT (5) 6.8 0.0068 P8 GC+1d culture CGCATACATA (4) 4.6 0.0046 P8 GC+1d culture GATTTAAAGG (2) 3.4 0.0034 P8 GC+1d culture GGACAGACAC (4) 2.3 0.0023 P8 GC+1d culture GTAGGCTGTT (3) 2.3 0.0023 P8 GC+1d culture GCCATCACAC (4) 1.1 0.0011 P8 GC+1d culture TGTTTTGTTC (5) 1.1 0.0011 P8 GC+SHH+1d culture ATTTAGAGGT (5) 15.2 0.0152 P8 GC+SHH+1d culture CGCATACATA (4) 4.7 0.0047 P8 GC+SHH+1d culture GTAGGCTGTT (3) 4.7 0.0047 P8 GC+SHH+1d culture GCAACAAACT (10) 2.3 0.0023 P8 GC+SHH+1d culture GCCATCACAC (4) 2.3 0.0023 P8 GC+SHH+1d culture CTGAAGGAGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GATTTAAAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTTTTGTTC (5) 1.2 0.0012 3T3 fibroblasts ATTTAGAGGT (5) 10.5 0.0105 3T3 fibroblasts GATTTAAAGG (2) 3.5 0.0035 3T3 fibroblasts GCAACAAACT (10) 3.5 0.0035 3T3 fibroblasts GTAGGCTGTT (3) 3.5 0.0035 3T3 fibroblasts TGTTTTGTTC (5) 3.5 0.0035 E15 cortex ATTTAGAGGT (5) 9.9 0.0099 E15 cortex GAAATGAAGA (7) 4.9 0.0049 P1 cortex ATTTAGAGGT (5) 9.1 0.0091 P1 cortex GAAATGAAGA (7) 4.5 0.0045 P1 cortex GCAACAAACT (10) 4.5 0.0045 P1 cortex GGACAGACAC (4) 4.5 0.0045 Hypothalamus ATTTAGAGGT (5) 7.2 0.0072 Hypothalamus GTAGGCTGTT (3) 7.2 0.0072 Hypothalamus GGACAGACAC (4) 3.6 0.0036 Hypothalamus CTGAAGGAGA (3) 1.8 0.0018 Hypothalamus GATTTAAAGG (2) 1.8 0.0018 E12.5 retina ATTTAGAGGT (5) 28.2 0.0282 E12.5 retina GATTTAAAGG (2) 15 0.015 E12.5 retina TGTTTTGTTC (5) 3.8 0.0038 E12.5 retina CGCATACATA (4) 1.9 0.0019 E12.5 retina GAAATGAAGA (7) 1.9 0.0019 E12.5 retina GCAACAAACT (10) 1.9 0.0019 E12.5 retina GTAGGCTGTT (3) 1.9 0.0019 E14.5 retina ATTTAGAGGT (5) 9.1 0.0091 E14.5 retina CGCATACATA (4) 3.6 0.0036 E14.5 retina GATTTAAAGG (2) 1.8 0.0018 E14.5 retina TGTTTTGTTC (5) 1.8 0.0018 E16.5 retina CGCATACATA (4) 7.2 0.0072 E16.5 retina GATTTAAAGG (2) 7.2 0.0072 E16.5 retina TGTTTTGTTC (5) 7.2 0.0072 E16.5 retina ATTTAGAGGT (5) 3.6 0.0036 E16.5 retina GCAACAAACT (10) 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina CTGAAGGAGA (3) 1.8 0.0018 E18.5 retina ATTTAGAGGT (5) 10.9 0.0109 E18.5 retina GATTTAAAGG (2) 3.6 0.0036 E18.5 retina GCAACAAACT (10) 1.8 0.0018 P0.5 retina ATTTAGAGGT (5) 27.5 0.0275 P0.5 retina GTAGGCTGTT (3) 9.8 0.0098 P0.5 retina GCAACAAACT (10) 7.9 0.0079 P0.5 retina ATTTAAGAGG 3.9 0.0039 P0.5 retina GATTTAAAGG (2) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina GGACAGACAC (4) 2 0.002 P0.5 retina TGTTTTGTTC (5) 2 0.002 P2.5 retina ATTTAGAGGT (5) 8.8 0.0088 P2.5 retina CGCATACATA (4) 3.5 0.0035 P2.5 retina GATTTAAAGG (2) 1.8 0.0018 P4.5 retina GATTTAAAGG (2) 7.9 0.0079 P4.5 retina CGCATACATA (4) 4 0.004 P4.5 retina TGTTTTGTTC (5) 4 0.004 P4.5 retina ATTTAGAGGT (5) 2 0.002 P6.5 retina CGCATACATA (4) 10 0.01 P6.5 retina TGTTTTGTTC (5) 6.7 0.0067 P6.5 retina ATTTAGAGGT (5) 3.3 0.0033 P6.5 retina GTAGGCTGTT (3) 3.3 0.0033 P6.5 retina ATTTAAGAGG 1.7 0.0017 P6.5 retina GATTTAAAGG (2) 1.7 0.0017 P6.5 retina GGACAGACAC (4) 1.7 0.0017 P10.5 crx- retina ATTTAGAGGT (5) 20.4 0.0204 P10.5 crx- retina GATTTAAAGG (2) 11.1 0.0111 P10.5 crx- retina CGCATACATA (4) 7.4 0.0074 P10.5 crx- retina GGACAGACAC (4) 1.9 0.0019 P10.5 crx- retina GTAGGCTGTT (3) 1.9 0.0019 P10.5 crx- retina TGTTTTGTTC (5) 1.9 0.0019 P10.5 crx+ retina CGCATACATA (4) 15.4 0.0154 P10.5 crx+ retina TGTTTTGTTC (5) 3.8 0.0038 P10.5 crx+ retina ATTTAGAGGT (5) 1.9 0.0019 P10.5 crx+ retina GAAATGAAGA (7) 1.9 0.0019 P10.5 crx+ retina GCAACAAACT (10) 1.9 0.0019 P10.5 crx+ retina GGACAGACAC (4) 1.9 0.0019 P10.5 crx+ retina GTAGGCTGTT (3) 1.9 0.0019 Adult retinal CGCATACATA (4) 13 0.013 Adult retinal ATTTAGAGGT (5) 5.6 0.0056 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal GGACAGACAC (4) 3.7 0.0037 Adult retinal CTGAAGGAGA (3) 1.9 0.0019 Adult retinal GATTTAAAGG (2) 1.9 0.0019 Adult retinal GCAACAAACT (10) 1.9 0.0019 Adult retinal GCCATCACAC (4) 1.9 0.0019 Adult retinal GTAGGCTGTT (3) 1.9 0.0019 Adult retinal TGTTTTGTTC (5) 1.9 0.0019 ONL CGCATACATA (4) 11.5 0.0115 ONL ATTTAGAGGT (5) 3.8 0.0038 ONL CTGAAGGAGA (3) 1.9 0.0019