Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29770
AI426748
expressed sequence AI426748
10
103206
Mm.29770
AI429613
expressed sequence AI429613
10
103213
Human Homolog
C6orf4[chromosome 6 open reading frame 4]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
TTTACAGCTG
(
6
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TTTACAGCTG
(
6
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
ATTTCCCTGA (
6
)
2.3
0.0023
P8 GC+1d culture
TTTACAGCTG
(
6
)
2.3
0.0023
P8 GC+1d culture
CTCAAATAAT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
ATTTCCCTGA (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
CTCAAATAAT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGGTGGAAA (
11
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTACAGCTG
(
6
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GCTACCCTCC
(
2
)
3.5
0.0035
3T3 fibroblasts
TTTACAGCTG
(
6
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
TTTACAGCTG
(
6
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
TTTACAGCTG
(
6
)
5.4
0.0054
Hypothalamus
GAGGTGGAAA (
11
)
3.6
0.0036
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GAGGTGGAAA (
11
)
3.8
0.0038
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
TTTACAGCTG
(
6
)
9.1
0.0091
E14.5 retina
GAGGTGGAAA (
11
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TTTACAGCTG
(
6
)
5.4
0.0054
E16.5 retina
GAGGTGGAAA (
11
)
3.6
0.0036
E16.5 retina
TGCCAACACT
(
3
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GAGGTGGAAA (
11
)
1.8
0.0018
E18.5 retina
TTTACAGCTG
(
6
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GCTACCCTCC
(
2
)
7.9
0.0079
P0.5 retina
GAGGTGGAAA (
11
)
2
0.002
P0.5 retina
TGCCAACACT
(
3
)
2
0.002
P0.5 retina
TTTACAGCTG
(
6
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GAGGTGGAAA (
11
)
8.8
0.0088
P2.5 retina
TTTACAGCTG
(
6
)
3.5
0.0035
P2.5 retina
TGCCAACACT
(
3
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GAGGTGGAAA (
11
)
5.9
0.0059
P4.5 retina
TTTACAGCTG
(
6
)
5.9
0.0059
P4.5 retina
CTCAAATAAT
(
2
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TTTACAGCTG
(
6
)
5
0.005
P6.5 retina
CTCAAATAAT
(
2
)
3.3
0.0033
P6.5 retina
GCTACCCTCC
(
2
)
3.3
0.0033
P6.5 retina
GAGGTGGAAA (
11
)
1.7
0.0017
P6.5 retina
TGCCAACACT
(
3
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GAGGTGGAAA (
11
)
3.7
0.0037
P10.5 crx- retina
TTTACAGCTG
(
6
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
TTTACAGCTG
(
6
)
3.8
0.0038
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TTTACAGCTG
(
6
)
3.7
0.0037
Adult retinal
GCTACCCTCC
(
2
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TTTACAGCTG
(
6
)
11.5
0.0115
ONL
GCTACCCTCC
(
2
)
1.9
0.0019
