Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297706	D11Wsu173e	DNA segment, Chr 11, Wayne State University 173, expressed	11	11 70.0 cM	28129
Mm.297706	Zc3hdc5	zinc finger CCCH type domain containing 5	11	11 E2	217331
Gene Ontology	nucleic acid binding | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	ZC3HDC5[zinc finger CCCH type domain containing 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGCGTG (14) 1.6 0.0016 Cb medulloblastoma TGTGTGCGTG (14) 4.6 0.0046 Cb medulloblastoma GATCTTTGGG (3) 2.3 0.0023 P8 GC+1d culture TGTGTGCGTG (14) 4.6 0.0046 P8 GC+1d culture ATAGAAAAAA (5) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGCGTG (14) 4.7 0.0047 P8 GC+SHH+1d culture ATAGAAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture CAGAGAGGGT (3) 1.2 0.0012 E15 cortex TGTGTGCGTG (14) 4.9 0.0049 P1 cortex TGTGTGCGTG (14) 9.1 0.0091 P1 cortex ATAGAAAAAA (5) 4.5 0.0045 Hypothalamus GATCTTTGGG (3) 1.8 0.0018 E12.5 retina GATCTTTGGG (3) 1.9 0.0019 E12.5 retina TGTGTGCGTG (14) 1.9 0.0019 E14.5 retina AATGCAAATG (3) 1.8 0.0018 E16.5 retina AATGCAAATG (3) 3.6 0.0036 E16.5 retina TGTGTGCGTG (14) 1.8 0.0018 P0.5 retina TGTGTGCGTG (14) 3.9 0.0039 P0.5 retina GATCTTTGGG (3) 2 0.002 P2.5 retina CAGAGAGGGT (3) 3.5 0.0035 P6.5 retina TGTGTGCGTG (14) 6.7 0.0067 P6.5 retina CAGAGAGGGT (3) 1.7 0.0017 P10.5 crx- retina GATCTTTGGG (3) 1.9 0.0019 P10.5 crx- retina TGTGTGCGTG (14) 1.9 0.0019 P10.5 crx+ retina CAGAGAGGGT (3) 1.9 0.0019 Adult retinal TGTGTGCGTG (14) 9.3 0.0093 Adult retinal CAGAGAGGGT (3) 3.7 0.0037 Adult retinal ATAGAAAAAA (5) 1.9 0.0019 Adult retinal GATCTTTGGG (3) 1.9 0.0019 ONL CAGAGAGGGT (3) 11.5 0.0115