Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29780	Nipa	nuclear interacting partner of anaplastic lymphoma kinase (Alk)	6		232679
Gene Ontology	anti-apoptosis | nucleus | protein binding
Human Homolog	NIPA[nuclear interacting partner of anaplastic lymphoma kinase (ALK)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTGAGCCTG (4) 17.9 0.0179 P8 Cb GC TAGCTCAGCA (3) 11.4 0.0114 P8 Cb GC CTCAAGTGCT (3) 3.3 0.0033 Cb medulloblastoma GGTGAGCCTG (4) 25.4 0.0254 Cb medulloblastoma TAGCTCAGCA (3) 9.2 0.0092 Cb medulloblastoma TGATGATGAA (4) 2.3 0.0023 P8 GC+1d culture GGTGAGCCTG (4) 41.1 0.0411 P8 GC+1d culture TAGCTCAGCA (3) 8 0.008 P8 GC+SHH+1d culture GGTGAGCCTG (4) 31.6 0.0316 P8 GC+SHH+1d culture TAGCTCAGCA (3) 12.9 0.0129 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TAGCTCAGCA (3) 3.5 0.0035 E15 cortex GGTGAGCCTG (4) 118.7 0.1187 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GGTGAGCCTG (4) 18.2 0.0182 Hypothalamus GGTGAGCCTG (4) 16.3 0.0163 Hypothalamus TAGCTCAGCA (3) 7.2 0.0072 E12.5 retina GGTGAGCCTG (4) 63.8 0.0638 E12.5 retina TAGCTCAGCA (3) 11.3 0.0113 E14.5 retina GGTGAGCCTG (4) 31 0.031 E14.5 retina TAGCTCAGCA (3) 20 0.02 E16.5 retina GGTGAGCCTG (4) 52.5 0.0525 E16.5 retina TAGCTCAGCA (3) 12.7 0.0127 E18.5 retina GGTGAGCCTG (4) 27.3 0.0273 E18.5 retina TAGCTCAGCA (3) 16.4 0.0164 P0.5 retina GGTGAGCCTG (4) 72.6 0.0726 P0.5 retina TAGCTCAGCA (3) 13.7 0.0137 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina GGTGAGCCTG (4) 29.9 0.0299 P2.5 retina TAGCTCAGCA (3) 10.6 0.0106 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GGTGAGCCTG (4) 29.7 0.0297 P4.5 retina TAGCTCAGCA (3) 11.9 0.0119 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GGTGAGCCTG (4) 31.7 0.0317 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina TAGCTCAGCA (3) 9.3 0.0093 P10.5 crx+ retina TAGCTCAGCA (3) 5.8 0.0058 Adult retinal GGTGAGCCTG (4) 16.7 0.0167 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAGCTCAGCA (3) 1.9 0.0019 ONL GGTGAGCCTG (4) 34.5 0.0345 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TAGCTCAGCA (3) 5.7 0.0057 ONL CTCAAGTGCT (3) 3.8 0.0038 ONL TGATGATGAA (4) 1.9 0.0019