Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297949	1700084E18Rik	RIKEN cDNA 1700084E18 gene	2		67350
Mm.297949	Lrrc8	leucine rich repeat containing 8	2		241296
Gene Ontology	integral to membrane
Human Homolog	LRRC8[leucine rich repeat containing 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAATCCG (2) 1.6 0.0016 P8 Cb GC GAAGGAAAAA (11) 1.6 0.0016 P8 Cb GC GACACCCAGG (5) 1.6 0.0016 P8 Cb GC GGTTTGCTCA (9) 1.6 0.0016 Cb medulloblastoma AAGCAATCCG (2) 13.9 0.0139 Cb medulloblastoma GGTTTGCTCA (9) 11.6 0.0116 Cb medulloblastoma CAAGGATTGT (2) 2.3 0.0023 Cb medulloblastoma GAAGGAAAAA (11) 2.3 0.0023 Cb medulloblastoma GAGGAGAAAA (5) 2.3 0.0023 P8 GC+1d culture AAGCAATCCG (2) 4.6 0.0046 P8 GC+1d culture GACACCCAGG (5) 4.6 0.0046 P8 GC+1d culture CAAGGATTGT (2) 2.3 0.0023 P8 GC+1d culture GGTTTGCTCA (9) 2.3 0.0023 P8 GC+1d culture GAGGAGAAAA (5) 1.1 0.0011 P8 GC+1d culture GTTAAGCAGC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAGCAATCCG (2) 10.5 0.0105 P8 GC+SHH+1d culture GAGGAGAAAA (5) 4.7 0.0047 P8 GC+SHH+1d culture CAAGGATTGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GAAGGAAAAA (11) 1.2 0.0012 P8 GC+SHH+1d culture GGTTTGCTCA (9) 1.2 0.0012 E15 cortex GAAGGAAAAA (11) 9.9 0.0099 E15 cortex GACACCCAGG (5) 4.9 0.0049 E15 cortex GGTTTGCTCA (9) 4.9 0.0049 P1 cortex GGTTTGCTCA (9) 9.1 0.0091 P1 cortex AAGCAATCCG (2) 4.5 0.0045 P1 cortex GAAGGAAAAA (11) 4.5 0.0045 Hypothalamus GACACCCAGG (5) 3.6 0.0036 Hypothalamus GGTTTGCTCA (9) 3.6 0.0036 Hypothalamus AAGCAATCCG (2) 1.8 0.0018 Hypothalamus CAAGGATTGT (2) 1.8 0.0018 E12.5 retina AAGCAATCCG (2) 7.5 0.0075 E12.5 retina GAAGGAAAAA (11) 5.6 0.0056 E12.5 retina GACACCCAGG (5) 1.9 0.0019 E14.5 retina CAAGGATTGT (2) 5.5 0.0055 E14.5 retina AAGCAATCCG (2) 1.8 0.0018 E14.5 retina GAAGGAAAAA (11) 1.8 0.0018 E16.5 retina AAGCAATCCG (2) 1.8 0.0018 E16.5 retina CAAGGATTGT (2) 1.8 0.0018 E16.5 retina GAAGGAAAAA (11) 1.8 0.0018 E16.5 retina GGTTTGCTCA (9) 1.8 0.0018 E18.5 retina GAAGGAAAAA (11) 16.4 0.0164 E18.5 retina GACACCCAGG (5) 1.8 0.0018 E18.5 retina GGTTTGCTCA (9) 1.8 0.0018 P0.5 retina GACACCCAGG (5) 5.9 0.0059 P0.5 retina GAAGGAAAAA (11) 3.9 0.0039 P0.5 retina AAGCAATCCG (2) 2 0.002 P0.5 retina GGTTTGCTCA (9) 2 0.002 P2.5 retina CAAGGATTGT (2) 3.5 0.0035 P2.5 retina GGTTTGCTCA (9) 3.5 0.0035 P2.5 retina GAAGGAAAAA (11) 1.8 0.0018 P2.5 retina GACACCCAGG (5) 1.8 0.0018 P2.5 retina GAGGAGAAAA (5) 1.8 0.0018 P4.5 retina AAGCAATCCG (2) 7.9 0.0079 P4.5 retina CAAGGATTGT (2) 5.9 0.0059 P4.5 retina GAAGGAAAAA (11) 5.9 0.0059 P6.5 retina CAAGGATTGT (2) 13.3 0.0133 P6.5 retina GGTTTGCTCA (9) 5 0.005 P6.5 retina GACACCCAGG (5) 3.3 0.0033 P10.5 crx- retina CAAGGATTGT (2) 9.3 0.0093 P10.5 crx- retina AAGCAATCCG (2) 7.4 0.0074 P10.5 crx- retina GGTTTGCTCA (9) 3.7 0.0037 P10.5 crx+ retina AAGCAATCCG (2) 13.5 0.0135 P10.5 crx+ retina GGTTTGCTCA (9) 7.7 0.0077 P10.5 crx+ retina CAAGGATTGT (2) 5.8 0.0058 P10.5 crx+ retina GAAGGAAAAA (11) 1.9 0.0019 Adult retinal GGTTTGCTCA (9) 13 0.013 Adult retinal AAGCAATCCG (2) 3.7 0.0037 Adult retinal CAAGGATTGT (2) 3.7 0.0037 Adult retinal GACACCCAGG (5) 3.7 0.0037 Adult retinal GTTAAGCAGC (2) 3.7 0.0037 ONL CAAGGATTGT (2) 5.7 0.0057 ONL GACACCCAGG (5) 5.7 0.0057 ONL GAAGGAAAAA (11) 3.8 0.0038 ONL GGTTTGCTCA (9) 3.8 0.0038 ONL AAGCAATCCG (2) 1.9 0.0019