Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.297970
A130038L21Rik
RIKEN cDNA A130038L21 gene
13
13 C3
218442
Mm.297970
D12Mgi17
DNA Segment, Chr 12, Mouse Genome Informatics 17
12
97832
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 11 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTAACTCTGT
(
2
)
14.7
0.0147
P8 Cb GC
CCATCCTTGG (
3
)
1.6
0.0016
P8 Cb GC
GATGGATTCT (
2
)
1.6
0.0016
P8 Cb GC
TGAGGAAATG (
7
)
1.6
0.0016
Cb medulloblastoma
GATGGATTCT (
2
)
2.3
0.0023
Cb medulloblastoma
TTAACTCTGT
(
2
)
2.3
0.0023
P8 GC+1d culture
TTAACTCTGT
(
2
)
17.1
0.0171
P8 GC+1d culture
GATGGATTCT (
2
)
2.3
0.0023
P8 GC+1d culture
TCAGAGACCT (
6
)
2.3
0.0023
P8 GC+1d culture
TTTGAGTTTT (
3
)
2.3
0.0023
P8 GC+1d culture
CCATCCTTGG (
3
)
1.1
0.0011
P8 GC+1d culture
TGAGGAAATG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TTAACTCTGT
(
2
)
26.9
0.0269
P8 GC+SHH+1d culture
CCATCCTTGG (
3
)
3.5
0.0035
P8 GC+SHH+1d culture
TGACTGTAAA
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
TGAGGAAATG (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
TCAGAGACCT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GATGGATTCT (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTGAGTTTT (
3
)
1.2
0.0012
E15 cortex
TGAGGAAATG (
7
)
4.9
0.0049
P1 cortex
TTAACTCTGT
(
2
)
9.1
0.0091
Hypothalamus
TTAACTCTGT
(
2
)
12.7
0.0127
Hypothalamus
GATGGATTCT (
2
)
3.6
0.0036
Hypothalamus
TCAGAGACCT (
6
)
1.8
0.0018
Hypothalamus
TGAGGAAATG (
7
)
1.8
0.0018
E12.5 retina
GATGGATTCT (
2
)
1.9
0.0019
E12.5 retina
GGTTTAGAAT (
5
)
1.9
0.0019
E12.5 retina
TTAACTCTGT
(
2
)
1.9
0.0019
E14.5 retina
TCAGAGACCT (
6
)
1.8
0.0018
E14.5 retina
TGAGGAAATG (
7
)
1.8
0.0018
E14.5 retina
TTAACTCTGT
(
2
)
1.8
0.0018
E16.5 retina
TTAACTCTGT
(
2
)
9.1
0.0091
E16.5 retina
GATGGATTCT (
2
)
1.8
0.0018
E16.5 retina
TGAGGAAATG (
7
)
1.8
0.0018
E18.5 retina
TTAACTCTGT
(
2
)
12.7
0.0127
E18.5 retina
GATGGATTCT (
2
)
1.8
0.0018
P0.5 retina
TTAACTCTGT
(
2
)
2
0.002
P2.5 retina
TTAACTCTGT
(
2
)
17.6
0.0176
P2.5 retina
CCATCCTTGG (
3
)
1.8
0.0018
P2.5 retina
TCAGAGACCT (
6
)
1.8
0.0018
P2.5 retina
TGAGGAAATG (
7
)
1.8
0.0018
P4.5 retina
TTAACTCTGT
(
2
)
25.8
0.0258
P4.5 retina
TCAGAGACCT (
6
)
2
0.002
P6.5 retina
TTAACTCTGT
(
2
)
16.7
0.0167
P6.5 retina
GATGGATTCT (
2
)
3.3
0.0033
P6.5 retina
TCAGAGACCT (
6
)
1.7
0.0017
P10.5 crx- retina
GATGGATTCT (
2
)
3.7
0.0037
P10.5 crx- retina
TTAACTCTGT
(
2
)
3.7
0.0037
P10.5 crx- retina
GGTTTAGAAT (
5
)
1.9
0.0019
P10.5 crx- retina
TTTGAGTTTT (
3
)
1.9
0.0019
P10.5 crx+ retina
TTAACTCTGT
(
2
)
11.5
0.0115
P10.5 crx+ retina
GGTTTAGAAT (
5
)
1.9
0.0019
Adult retinal
TTAACTCTGT
(
2
)
5.6
0.0056
Adult retinal
CCATCCTTGG (
3
)
1.9
0.0019
ONL
TTAACTCTGT
(
2
)
3.8
0.0038
ONL
TCAGAGACCT (
6
)
1.9
0.0019
ONL
TGAGGAAATG (
7
)
1.9
0.0019
