Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297977	Sycp3	synaptonemal complex protein 3	10		20962
Gene Ontology	condensed chromosome | lateral element | meiosis | mitosis | nucleus | protein binding | synaptonemal complex
Human Homolog	SYCP3[synaptonemal complex protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TGTCATTTAA (3) 1.6 0.0016 P8 Cb GC TTTAATTTTT (7) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GTGTACAGAC 4.6 0.0046 Cb medulloblastoma TGTCATTTAA (3) 4.6 0.0046 Cb medulloblastoma GAAAAGAAAA (12) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GTGTACAGAC 1.1 0.0011 P8 GC+1d culture TTTAATTTTT (7) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GAAAAGAAAA (12) 4.7 0.0047 P8 GC+SHH+1d culture GAAAGAAAAG (4) 1.2 0.0012 P8 GC+SHH+1d culture GTGTACAGAC 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GTGTACAGAC 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TGTCATTTAA (3) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TGTCATTTAA (3) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TACATACAAA (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GGAAAAAAAT (11) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GTGTACAGAC 2 0.002 P0.5 retina TACATACAAA (2) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GAAAAGAAAA (12) 1.8 0.0018 P2.5 retina GGAAAAAAAT (11) 1.8 0.0018 P2.5 retina TTTAATTTTT (7) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GAAAAGAAAA (12) 2 0.002 P4.5 retina TGTCATTTAA (3) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GGAAAAAAAT (11) 1.7 0.0017 P6.5 retina TTTAATTTTT (7) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TACATACAAA (2) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GTGTACAGAC 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GAAAGAAAAG (4) 1.9 0.0019 ONL GGAAAAAAAT (11) 1.9 0.0019 ONL TACATACAAA (2) 1.9 0.0019