Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29801
1110011K10Rik
RIKEN cDNA 1110011K10 gene
9
66126
Human Homolog
MGC4549[hypothetical protein MGC4549]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGCCCATCAA
(
2
)
13.1
0.0131
Cb medulloblastoma
AGCCCATCAA
(
2
)
9.2
0.0092
P8 GC+1d culture
AGCCCATCAA
(
2
)
13.7
0.0137
P8 GC+1d culture
GAACCCTGAG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AGCCCATCAA
(
2
)
21.1
0.0211
P8 GC+SHH+1d culture
GAACCCTGAG
(
3
)
10.5
0.0105
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
AGCCCATCAA
(
2
)
3.5
0.0035
E15 cortex
GAACCCTGAG
(
3
)
14.8
0.0148
E15 cortex
AGCCCATCAA
(
2
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GAACCCTGAG
(
3
)
9.1
0.0091
P1 cortex
AGCCCATCAA
(
2
)
4.5
0.0045
Hypothalamus
AGCCCATCAA
(
2
)
19.9
0.0199
Hypothalamus
GAACCCTGAG
(
3
)
10.9
0.0109
E12.5 retina
AGCCCATCAA
(
2
)
39.4
0.0394
E12.5 retina
GAACCCTGAG
(
3
)
9.4
0.0094
E14.5 retina
AGCCCATCAA
(
2
)
12.8
0.0128
E14.5 retina
GAACCCTGAG
(
3
)
3.6
0.0036
E16.5 retina
AGCCCATCAA
(
2
)
23.5
0.0235
E16.5 retina
GAACCCTGAG
(
3
)
10.9
0.0109
E16.5 retina
AGGCCACCCT (
3
)
1.8
0.0018
E18.5 retina
AGCCCATCAA
(
2
)
41.8
0.0418
E18.5 retina
GAACCCTGAG
(
3
)
7.3
0.0073
P0.5 retina
GAACCCTGAG
(
3
)
19.6
0.0196
P0.5 retina
AGCCCATCAA
(
2
)
9.8
0.0098
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P2.5 retina
AGCCCATCAA
(
2
)
15.8
0.0158
P2.5 retina
GAACCCTGAG
(
3
)
12.3
0.0123
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
AGCCCATCAA
(
2
)
7.9
0.0079
P4.5 retina
GAACCCTGAG
(
3
)
7.9
0.0079
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
AGCCCATCAA
(
2
)
13.3
0.0133
P6.5 retina
GAACCCTGAG
(
3
)
13.3
0.0133
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
AGCCCATCAA
(
2
)
24.2
0.0242
P10.5 crx- retina
GAACCCTGAG
(
3
)
16.7
0.0167
P10.5 crx- retina
AGGCCACCCT (
3
)
3.7
0.0037
P10.5 crx+ retina
AGCCCATCAA
(
2
)
25
0.025
P10.5 crx+ retina
GAACCCTGAG
(
3
)
3.8
0.0038
Adult retinal
GAACCCTGAG
(
3
)
13
0.013
Adult retinal
AGCCCATCAA
(
2
)
7.4
0.0074
Adult retinal
AGGCCACCCT (
3
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GAACCCTGAG
(
3
)
17.2
0.0172
ONL
AGCCCATCAA
(
2
)
9.6
0.0096
ONL
GTCATAGCTG (
590
)
5.7
0.0057
