Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.29811
1190002H23Rik
RIKEN cDNA 1190002H23 gene
14
66214
Mm.29811
1700010B09Rik
RIKEN cDNA 1700010B09 gene
14
69341
Mm.29811
A130038J17Rik
RIKEN cDNA A130038J17 gene
14
320628
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
AAGCGGCGCA
(
6
)
3.3
0.0033
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
3T3 fibroblasts
AAGCGGCGCA
(
6
)
7
0.007
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
GACTCTGTGG
(
4
)
5.4
0.0054
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P10.5 crx- retina
AAGCGGCGCA
(
6
)
3.7
0.0037
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
