Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29820	2310068C19Rik	RIKEN cDNA 2310068C19 gene	14		70205
Mm.29820	Bnip3l	BCL2/adenovirus E1B 19kDa-interacting protein 3-like	14	14 D1 (14 28.0 cM)	12177
Gene Ontology	apoptosis | integral to membrane | mitochondrion | regulation of apoptosis
Human Homolog	BNIP3L[BCL2/adenovirus E1B 19kDa interacting protein 3-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 117 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGTTACATC (5) 11.4 0.0114 P8 Cb GC TAACTTGTAG (6) 11.4 0.0114 P8 Cb GC TTTGGATGTT (8) 8.2 0.0082 P8 Cb GC TTGATGTTGA (5) 4.9 0.0049 P8 Cb GC AATGATGCAG (4) 3.3 0.0033 P8 Cb GC AAGAAAGGGG (7) 1.6 0.0016 P8 Cb GC TTTGATGGTT (3) 1.6 0.0016 Cb medulloblastoma CAGTTACATC (5) 6.9 0.0069 Cb medulloblastoma TAACTTGTAG (6) 6.9 0.0069 Cb medulloblastoma TTTGGATGTT (8) 6.9 0.0069 Cb medulloblastoma TTGATGTTGA (5) 4.6 0.0046 Cb medulloblastoma AATGATGCAG (4) 2.3 0.0023 Cb medulloblastoma TCACTCTGGC (3) 2.3 0.0023 Cb medulloblastoma TTTGATGGTT (3) 2.3 0.0023 P8 GC+1d culture TAACTTGTAG (6) 20.5 0.0205 P8 GC+1d culture TTGATGTTGA (5) 17.1 0.0171 P8 GC+1d culture AATGATGCAG (4) 6.8 0.0068 P8 GC+1d culture CAGTTACATC (5) 6.8 0.0068 P8 GC+1d culture TTTGGATGTT (8) 6.8 0.0068 P8 GC+1d culture ACTTTGTTTC (4) 3.4 0.0034 P8 GC+1d culture AAGAAAGGGG (7) 2.3 0.0023 P8 GC+1d culture GTGTTAATAG (2) 2.3 0.0023 P8 GC+1d culture AATCTTCAAG (7) 1.1 0.0011 P8 GC+SHH+1d culture TTGATGTTGA (5) 22.2 0.0222 P8 GC+SHH+1d culture TAACTTGTAG (6) 19.9 0.0199 P8 GC+SHH+1d culture CAGTTACATC (5) 11.7 0.0117 P8 GC+SHH+1d culture TTTGGATGTT (8) 11.7 0.0117 P8 GC+SHH+1d culture AATGATGCAG (4) 3.5 0.0035 P8 GC+SHH+1d culture TCACTCTGGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTGATGGTT (3) 1.2 0.0012 3T3 fibroblasts CAGTTACATC (5) 3.5 0.0035 3T3 fibroblasts TAACTTGTAG (6) 3.5 0.0035 3T3 fibroblasts TTGATGTTGA (5) 3.5 0.0035 E15 cortex TAACTTGTAG (6) 14.8 0.0148 E15 cortex AATCTTCAAG (7) 4.9 0.0049 E15 cortex AATGATGCAG (4) 4.9 0.0049 P1 cortex AATGATGCAG (4) 4.5 0.0045 P1 cortex TAACTTGTAG (6) 4.5 0.0045 P1 cortex TTGATGTTGA (5) 4.5 0.0045 P1 cortex TTTGGATGTT (8) 4.5 0.0045 Hypothalamus TTGATGTTGA (5) 18.1 0.0181 Hypothalamus TAACTTGTAG (6) 12.7 0.0127 Hypothalamus TTTGGATGTT (8) 9.1 0.0091 Hypothalamus CAGTTACATC (5) 5.4 0.0054 Hypothalamus TCACTCTGGC (3) 3.6 0.0036 E12.5 retina TTGATGTTGA (5) 26.3 0.0263 E12.5 retina TAACTTGTAG (6) 22.5 0.0225 E12.5 retina CAGTTACATC (5) 7.5 0.0075 E12.5 retina AATCTTCAAG (7) 1.9 0.0019 E12.5 retina AATGATGCAG (4) 1.9 0.0019 E12.5 retina ACTTTGTTTC (4) 1.9 0.0019 E12.5 retina GTGTTAATAG (2) 1.9 0.0019 E14.5 retina TTGATGTTGA (5) 21.9 0.0219 E14.5 retina TAACTTGTAG (6) 18.2 0.0182 E14.5 retina TTTGGATGTT (8) 9.1 0.0091 E14.5 retina AATGATGCAG (4) 7.3 0.0073 E14.5 retina CAGTTACATC (5) 5.5 0.0055 E14.5 retina TCACTCTGGC (3) 3.6 0.0036 E14.5 retina GTGTTAATAG (2) 1.8 0.0018 E16.5 retina TAACTTGTAG (6) 21.7 0.0217 E16.5 retina TTGATGTTGA (5) 21.7 0.0217 E16.5 retina CAGTTACATC (5) 12.7 0.0127 E16.5 retina AATGATGCAG (4) 9.1 0.0091 E16.5 retina TTTGGATGTT (8) 7.2 0.0072 E16.5 retina TCACTCTGGC (3) 5.4 0.0054 E16.5 retina ACTTTGTTTC (4) 1.8 0.0018 E16.5 retina TTTGATGGTT (3) 1.8 0.0018 E18.5 retina TAACTTGTAG (6) 50.9 0.0509 E18.5 retina TTGATGTTGA (5) 16.4 0.0164 E18.5 retina TTTGGATGTT (8) 10.9 0.0109 E18.5 retina CAGTTACATC (5) 9.1 0.0091 E18.5 retina AATGATGCAG (4) 1.8 0.0018 E18.5 retina TCACTCTGGC (3) 1.8 0.0018 P0.5 retina TAACTTGTAG (6) 17.7 0.0177 P0.5 retina CAGTTACATC (5) 9.8 0.0098 P0.5 retina AATGATGCAG (4) 7.9 0.0079 P0.5 retina TTTGGATGTT (8) 7.9 0.0079 P0.5 retina ACTTTGTTTC (4) 5.9 0.0059 P0.5 retina TTGATGTTGA (5) 3.9 0.0039 P2.5 retina TAACTTGTAG (6) 26.4 0.0264 P2.5 retina CAGTTACATC (5) 10.6 0.0106 P2.5 retina TTGATGTTGA (5) 10.6 0.0106 P2.5 retina TTTGGATGTT (8) 8.8 0.0088 P2.5 retina AATGATGCAG (4) 5.3 0.0053 P2.5 retina ACTTTGTTTC (4) 1.8 0.0018 P2.5 retina TCACTCTGGC (3) 1.8 0.0018 P4.5 retina TAACTTGTAG (6) 45.6 0.0456 P4.5 retina TTTGGATGTT (8) 17.8 0.0178 P4.5 retina CAGTTACATC (5) 15.9 0.0159 P4.5 retina AATGATGCAG (4) 7.9 0.0079 P4.5 retina TTGATGTTGA (5) 7.9 0.0079 P4.5 retina GTGTTAATAG (2) 2 0.002 P6.5 retina TAACTTGTAG (6) 25 0.025 P6.5 retina TTTGGATGTT (8) 13.3 0.0133 P6.5 retina TTGATGTTGA (5) 10 0.01 P6.5 retina AATGATGCAG (4) 5 0.005 P6.5 retina CAGTTACATC (5) 3.3 0.0033 P6.5 retina AAGAAAGGGG (7) 1.7 0.0017 P10.5 crx- retina TAACTTGTAG (6) 16.7 0.0167 P10.5 crx- retina TTGATGTTGA (5) 14.9 0.0149 P10.5 crx- retina TTTGGATGTT (8) 7.4 0.0074 P10.5 crx- retina CAGTTACATC (5) 5.6 0.0056 P10.5 crx- retina TCACTCTGGC (3) 5.6 0.0056 P10.5 crx- retina ACTTTGTTTC (4) 3.7 0.0037 P10.5 crx+ retina TTTGGATGTT (8) 23.1 0.0231 P10.5 crx+ retina TAACTTGTAG (6) 17.3 0.0173 P10.5 crx+ retina CAGTTACATC (5) 7.7 0.0077 P10.5 crx+ retina TTGATGTTGA (5) 5.8 0.0058 P10.5 crx+ retina AATGATGCAG (4) 3.8 0.0038 Adult retinal TAACTTGTAG (6) 11.1 0.0111 Adult retinal TTGATGTTGA (5) 3.7 0.0037 Adult retinal CAGTTACATC (5) 1.9 0.0019 Adult retinal TTTGGATGTT (8) 1.9 0.0019 ONL TAACTTGTAG (6) 11.5 0.0115 ONL TTTGGATGTT (8) 5.7 0.0057 ONL TTGATGTTGA (5) 3.8 0.0038 ONL AATGATGCAG (4) 1.9 0.0019