Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29845	Suclg1	succinate-CoA ligase, GDP-forming, alpha subunit	6		56451
Gene Ontology	catalytic activity | glycolysis | GTP binding | ligase activity | metabolism | mitochondrion | tricarboxylic acid cycle
Human Homolog	SUCLG1[succinate-CoA ligase, GDP-forming, alpha subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCTCCAGC (7) 57.1 0.0571 P8 Cb GC CAGCTGACAC (2) 16.3 0.0163 P8 Cb GC CAAATGATAA (2) 6.5 0.0065 P8 Cb GC CCTTGGGCCA (3) 6.5 0.0065 Cb medulloblastoma GCTCTCCAGC (7) 161.9 0.1619 Cb medulloblastoma CAGCTGACAC (2) 23.1 0.0231 Cb medulloblastoma CAAATGATAA (2) 2.3 0.0023 P8 GC+1d culture GCTCTCCAGC (7) 69.6 0.0696 P8 GC+1d culture CAGCTGACAC (2) 6.8 0.0068 P8 GC+1d culture CAAATGATAA (2) 3.4 0.0034 P8 GC+1d culture CCTTGGGCCA (3) 1.1 0.0011 P8 GC+1d culture GGGTGAGAGC 1.1 0.0011 P8 GC+SHH+1d culture GCTCTCCAGC (7) 74.9 0.0749 P8 GC+SHH+1d culture CAGCTGACAC (2) 28.1 0.0281 P8 GC+SHH+1d culture CAAATGATAA (2) 1.2 0.0012 P8 GC+SHH+1d culture CAGGGGCAAT 1.2 0.0012 P8 GC+SHH+1d culture CCTTGGGCCA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGTGAGAGC 1.2 0.0012 3T3 fibroblasts GCTCTCCAGC (7) 28 0.028 3T3 fibroblasts CAGCTGACAC (2) 21 0.021 3T3 fibroblasts CCTTGGGCCA (3) 14 0.014 3T3 fibroblasts CAGGGGCAAT 3.5 0.0035 3T3 fibroblasts GCCCATCCTT 3.5 0.0035 3T3 fibroblasts TCCCCGAACA 3.5 0.0035 E15 cortex GCTCTCCAGC (7) 69.3 0.0693 E15 cortex GGGTGAGAGC 4.9 0.0049 P1 cortex GCTCTCCAGC (7) 54.5 0.0545 P1 cortex TCCCCGAACA 22.7 0.0227 P1 cortex CAAATGATAA (2) 9.1 0.0091 P1 cortex CAGCTGACAC (2) 4.5 0.0045 Hypothalamus GCTCTCCAGC (7) 77.9 0.0779 Hypothalamus CAGCTGACAC (2) 32.6 0.0326 Hypothalamus CCTTGGGCCA (3) 1.8 0.0018 Hypothalamus GGCTGACAGC (3) 1.8 0.0018 Hypothalamus GTCTCCAGCA (5) 1.8 0.0018 E12.5 retina GCTCTCCAGC (7) 50.7 0.0507 E12.5 retina CAGCTGACAC (2) 20.7 0.0207 E12.5 retina CAAATGATAA (2) 3.8 0.0038 E12.5 retina GGGTGAGAGC 3.8 0.0038 E14.5 retina GCTCTCCAGC (7) 72.9 0.0729 E14.5 retina CAGCTGACAC (2) 9.1 0.0091 E14.5 retina CAAATGATAA (2) 1.8 0.0018 E14.5 retina GGGTGAGAGC 1.8 0.0018 E16.5 retina GCTCTCCAGC (7) 97.8 0.0978 E16.5 retina CAGCTGACAC (2) 7.2 0.0072 E16.5 retina GGGTGAGAGC 3.6 0.0036 E16.5 retina CAAATGATAA (2) 1.8 0.0018 E16.5 retina CCTTGGGCCA (3) 1.8 0.0018 E16.5 retina GCCCATCCTT 1.8 0.0018 E18.5 retina GCTCTCCAGC (7) 125.5 0.1255 E18.5 retina CAGCTGACAC (2) 16.4 0.0164 E18.5 retina CCTTGGGCCA (3) 3.6 0.0036 E18.5 retina CAAATGATAA (2) 1.8 0.0018 E18.5 retina GGGTGAGAGC 1.8 0.0018 P0.5 retina GCTCTCCAGC (7) 66.7 0.0667 P0.5 retina CAGCTGACAC (2) 9.8 0.0098 P0.5 retina GTCTCCAGCA (5) 3.9 0.0039 P0.5 retina GCCCATCCTT 2 0.002 P0.5 retina TCCCCGAACA 2 0.002 P2.5 retina GCTCTCCAGC (7) 75.7 0.0757 P2.5 retina CAGCTGACAC (2) 15.8 0.0158 P2.5 retina CAAATGATAA (2) 10.6 0.0106 P2.5 retina GGGTGAGAGC 5.3 0.0053 P2.5 retina CAGGGGCAAT 1.8 0.0018 P2.5 retina CCTTGGGCCA (3) 1.8 0.0018 P2.5 retina GGCTGACAGC (3) 1.8 0.0018 P4.5 retina GCTCTCCAGC (7) 65.4 0.0654 P4.5 retina CAAATGATAA (2) 13.9 0.0139 P4.5 retina CAGCTGACAC (2) 13.9 0.0139 P4.5 retina CAGGGGCAAT 2 0.002 P4.5 retina CCTTGGGCCA (3) 2 0.002 P6.5 retina GCTCTCCAGC (7) 81.7 0.0817 P6.5 retina CAGCTGACAC (2) 13.3 0.0133 P6.5 retina CAAATGATAA (2) 5 0.005 P6.5 retina CCTTGGGCCA (3) 1.7 0.0017 P6.5 retina GGCTGACAGC (3) 1.7 0.0017 P10.5 crx- retina GCTCTCCAGC (7) 55.7 0.0557 P10.5 crx- retina CAGCTGACAC (2) 33.4 0.0334 P10.5 crx- retina CAAATGATAA (2) 3.7 0.0037 P10.5 crx- retina CCTTGGGCCA (3) 3.7 0.0037 P10.5 crx+ retina GCTCTCCAGC (7) 94.2 0.0942 P10.5 crx+ retina CAGCTGACAC (2) 32.7 0.0327 P10.5 crx+ retina CAAATGATAA (2) 3.8 0.0038 Adult retinal GCTCTCCAGC (7) 57.4 0.0574 Adult retinal CAGCTGACAC (2) 9.3 0.0093 Adult retinal TCCCCGAACA 3.7 0.0037 Adult retinal CCTTGGGCCA (3) 1.9 0.0019 Adult retinal GGGTGAGAGC 1.9 0.0019 ONL GCTCTCCAGC (7) 28.7 0.0287 ONL CAAATGATAA (2) 9.6 0.0096 ONL CAGCTGACAC (2) 5.7 0.0057 ONL CCTTGGGCCA (3) 3.8 0.0038 ONL GGGTGAGAGC 1.9 0.0019